Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
B020004C17RikJ3QP07 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
B020004C17RikJ3QP07 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
B020004C17RikJ3QP07 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
B020004C17RikJ3QP07 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
B020004C17RikJ3QP07 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
B020004C17RikJ3QP07 Gm23935-201ENSMUST00000102303 57 ntBASIC18.45■□□□□ 0.54
B020004C17RikJ3QP07 Gm24270-201ENSMUST00000102326 57 ntBASIC18.45■□□□□ 0.54
B020004C17RikJ3QP07 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.45■□□□□ 0.54
B020004C17RikJ3QP07 Gm24245-201ENSMUST00000157318 57 ntBASIC18.45■□□□□ 0.54
B020004C17RikJ3QP07 Gm24513-201ENSMUST00000174964 138 ntBASIC18.45■□□□□ 0.54
B020004C17RikJ3QP07 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
B020004C17RikJ3QP07 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
B020004C17RikJ3QP07 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
B020004C17RikJ3QP07 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
B020004C17RikJ3QP07 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
B020004C17RikJ3QP07 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.44■□□□□ 0.54
B020004C17RikJ3QP07 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
B020004C17RikJ3QP07 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
B020004C17RikJ3QP07 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.44■□□□□ 0.54
B020004C17RikJ3QP07 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.44■□□□□ 0.54
B020004C17RikJ3QP07 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
B020004C17RikJ3QP07 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
B020004C17RikJ3QP07 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
B020004C17RikJ3QP07 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
B020004C17RikJ3QP07 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
B020004C17RikJ3QP07 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
B020004C17RikJ3QP07 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
B020004C17RikJ3QP07 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.44■□□□□ 0.54
B020004C17RikJ3QP07 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
B020004C17RikJ3QP07 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
B020004C17RikJ3QP07 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.43■□□□□ 0.54
B020004C17RikJ3QP07 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.43■□□□□ 0.54
B020004C17RikJ3QP07 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
B020004C17RikJ3QP07 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
B020004C17RikJ3QP07 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
B020004C17RikJ3QP07 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
B020004C17RikJ3QP07 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
B020004C17RikJ3QP07 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.43■□□□□ 0.54
B020004C17RikJ3QP07 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.43■□□□□ 0.54
B020004C17RikJ3QP07 Gm27397-201ENSMUST00000184997 107 ntBASIC18.43■□□□□ 0.54
B020004C17RikJ3QP07 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.43■□□□□ 0.54
B020004C17RikJ3QP07 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.43■□□□□ 0.54
B020004C17RikJ3QP07 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
B020004C17RikJ3QP07 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
B020004C17RikJ3QP07 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
B020004C17RikJ3QP07 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
B020004C17RikJ3QP07 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
B020004C17RikJ3QP07 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
B020004C17RikJ3QP07 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
B020004C17RikJ3QP07 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
B020004C17RikJ3QP07 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.42■□□□□ 0.54
B020004C17RikJ3QP07 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
B020004C17RikJ3QP07 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
B020004C17RikJ3QP07 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.42■□□□□ 0.54
B020004C17RikJ3QP07 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.42■□□□□ 0.54
B020004C17RikJ3QP07 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
B020004C17RikJ3QP07 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
B020004C17RikJ3QP07 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
B020004C17RikJ3QP07 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
B020004C17RikJ3QP07 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
B020004C17RikJ3QP07 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
B020004C17RikJ3QP07 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
B020004C17RikJ3QP07 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
B020004C17RikJ3QP07 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
B020004C17RikJ3QP07 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
B020004C17RikJ3QP07 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
B020004C17RikJ3QP07 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
B020004C17RikJ3QP07 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
B020004C17RikJ3QP07 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
B020004C17RikJ3QP07 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
B020004C17RikJ3QP07 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
B020004C17RikJ3QP07 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.41■□□□□ 0.54
B020004C17RikJ3QP07 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.41■□□□□ 0.54
B020004C17RikJ3QP07 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.41■□□□□ 0.54
B020004C17RikJ3QP07 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
B020004C17RikJ3QP07 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
B020004C17RikJ3QP07 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
B020004C17RikJ3QP07 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
B020004C17RikJ3QP07 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
B020004C17RikJ3QP07 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
B020004C17RikJ3QP07 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
B020004C17RikJ3QP07 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
B020004C17RikJ3QP07 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
B020004C17RikJ3QP07 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
B020004C17RikJ3QP07 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
B020004C17RikJ3QP07 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
B020004C17RikJ3QP07 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
B020004C17RikJ3QP07 Gm4995-201ENSMUST00000117247 432 ntBASIC18.4■□□□□ 0.54
B020004C17RikJ3QP07 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.4■□□□□ 0.54
B020004C17RikJ3QP07 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
B020004C17RikJ3QP07 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
B020004C17RikJ3QP07 Mir6404-201ENSMUST00000183699 94 ntBASIC18.4■□□□□ 0.54
B020004C17RikJ3QP07 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
B020004C17RikJ3QP07 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
B020004C17RikJ3QP07 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
B020004C17RikJ3QP07 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
B020004C17RikJ3QP07 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
B020004C17RikJ3QP07 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
B020004C17RikJ3QP07 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms