Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim34bJ3QNR8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim34bJ3QNR8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim34bJ3QNR8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.2■□□□□ 0.82
Trim34bJ3QNR8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Trim34bJ3QNR8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.2■□□□□ 0.82
Trim34bJ3QNR8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim34bJ3QNR8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.2■□□□□ 0.82
Trim34bJ3QNR8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.2■□□□□ 0.82
Trim34bJ3QNR8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim34bJ3QNR8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim34bJ3QNR8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Trim34bJ3QNR8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim34bJ3QNR8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim34bJ3QNR8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim34bJ3QNR8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim34bJ3QNR8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim34bJ3QNR8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34bJ3QNR8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Trim34bJ3QNR8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Trim34bJ3QNR8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34bJ3QNR8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34bJ3QNR8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34bJ3QNR8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34bJ3QNR8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34bJ3QNR8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34bJ3QNR8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34bJ3QNR8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34bJ3QNR8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34bJ3QNR8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34bJ3QNR8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34bJ3QNR8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.19■□□□□ 0.82
Trim34bJ3QNR8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.19■□□□□ 0.82
Trim34bJ3QNR8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34bJ3QNR8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Trim34bJ3QNR8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim34bJ3QNR8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Trim34bJ3QNR8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim34bJ3QNR8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim34bJ3QNR8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim34bJ3QNR8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.18■□□□□ 0.82
Trim34bJ3QNR8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.18■□□□□ 0.82
Trim34bJ3QNR8 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.18■□□□□ 0.82
Trim34bJ3QNR8 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.18■□□□□ 0.82
Trim34bJ3QNR8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Trim34bJ3QNR8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.18■□□□□ 0.82
Trim34bJ3QNR8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim34bJ3QNR8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim34bJ3QNR8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20.18■□□□□ 0.82
Trim34bJ3QNR8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim34bJ3QNR8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim34bJ3QNR8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trim34bJ3QNR8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Rarb-207ENSMUST00000225921 2756 ntBASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Rps4l-201ENSMUST00000071745 943 ntBASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim34bJ3QNR8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms