Protein–RNA interactions for Protein: J3QMS8

Gm3415, Predicted gene 3415, mousemouse

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3415J3QMS8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3415J3QMS8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm3415J3QMS8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.66■□□□□ 0.42
Gm3415J3QMS8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Gm13186-201ENSMUST00000118031 316 ntBASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Gm3415J3QMS8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gm3415J3QMS8 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm3415J3QMS8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3415J3QMS8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3415J3QMS8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Gm3415J3QMS8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3415J3QMS8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Gm3415J3QMS8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Gm3415J3QMS8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3415J3QMS8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.63■□□□□ 0.41
Gm3415J3QMS8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3415J3QMS8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.63■□□□□ 0.41
Gm3415J3QMS8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3415J3QMS8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3415J3QMS8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm3415J3QMS8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3415J3QMS8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3415J3QMS8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3415J3QMS8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3415J3QMS8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3415J3QMS8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3415J3QMS8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms