Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna9G3X8Z7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna9G3X8Z7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna9G3X8Z7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.79■□□□□ 0.44
Chrna9G3X8Z7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna9G3X8Z7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.79■□□□□ 0.44
Chrna9G3X8Z7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna9G3X8Z7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna9G3X8Z7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna9G3X8Z7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna9G3X8Z7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.79■□□□□ 0.44
Chrna9G3X8Z7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna9G3X8Z7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna9G3X8Z7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.78■□□□□ 0.44
Chrna9G3X8Z7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Chrna9G3X8Z7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna9G3X8Z7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna9G3X8Z7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna9G3X8Z7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna9G3X8Z7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Chrna9G3X8Z7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna9G3X8Z7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna9G3X8Z7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna9G3X8Z7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna9G3X8Z7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.78■□□□□ 0.44
Chrna9G3X8Z7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.78■□□□□ 0.44
Chrna9G3X8Z7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna9G3X8Z7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna9G3X8Z7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna9G3X8Z7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.78■□□□□ 0.44
Chrna9G3X8Z7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna9G3X8Z7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna9G3X8Z7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna9G3X8Z7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chrna9G3X8Z7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Chrna9G3X8Z7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chrna9G3X8Z7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chrna9G3X8Z7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chrna9G3X8Z7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chrna9G3X8Z7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chrna9G3X8Z7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chrna9G3X8Z7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chrna9G3X8Z7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chrna9G3X8Z7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chrna9G3X8Z7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chrna9G3X8Z7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chrna9G3X8Z7 Gm11336-201ENSMUST00000118168 334 ntBASIC17.77■□□□□ 0.44
Chrna9G3X8Z7 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.77■□□□□ 0.44
Chrna9G3X8Z7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.77■□□□□ 0.44
Chrna9G3X8Z7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.77■□□□□ 0.44
Chrna9G3X8Z7 Gm36967-201ENSMUST00000193814 266 ntBASIC17.77■□□□□ 0.44
Chrna9G3X8Z7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.77■□□□□ 0.44
Chrna9G3X8Z7 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.77■□□□□ 0.44
Chrna9G3X8Z7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chrna9G3X8Z7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chrna9G3X8Z7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chrna9G3X8Z7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.77■□□□□ 0.44
Chrna9G3X8Z7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
Chrna9G3X8Z7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chrna9G3X8Z7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chrna9G3X8Z7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chrna9G3X8Z7 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chrna9G3X8Z7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna9G3X8Z7 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna9G3X8Z7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Chrna9G3X8Z7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna9G3X8Z7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.75■□□□□ 0.43
Chrna9G3X8Z7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna9G3X8Z7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna9G3X8Z7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna9G3X8Z7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna9G3X8Z7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna9G3X8Z7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Chrna9G3X8Z7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna9G3X8Z7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna9G3X8Z7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna9G3X8Z7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna9G3X8Z7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms