Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Atf6F6VAN0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.99■□□□□ 0.31
Atf6F6VAN0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.99■□□□□ 0.31
Atf6F6VAN0 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.99■□□□□ 0.31
Atf6F6VAN0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Atf6F6VAN0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Atf6F6VAN0 Actl10-202ENSMUST00000226583 1501 ntBASIC16.99■□□□□ 0.31
Atf6F6VAN0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Atf6F6VAN0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Atf6F6VAN0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Atf6F6VAN0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Atf6F6VAN0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6F6VAN0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6F6VAN0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6F6VAN0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6F6VAN0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6F6VAN0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6F6VAN0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6F6VAN0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6F6VAN0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6F6VAN0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6F6VAN0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6F6VAN0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.98■□□□□ 0.31
Atf6F6VAN0 Mir5130-201ENSMUST00000175160 84 ntBASIC16.98■□□□□ 0.31
Atf6F6VAN0 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.98■□□□□ 0.31
Atf6F6VAN0 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.98■□□□□ 0.31
Atf6F6VAN0 Gm10566-201ENSMUST00000086739 996 ntBASIC16.98■□□□□ 0.31
Atf6F6VAN0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6F6VAN0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6F6VAN0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6F6VAN0 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.98■□□□□ 0.31
Atf6F6VAN0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6F6VAN0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6F6VAN0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6F6VAN0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6F6VAN0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Atf6F6VAN0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Gm18959-201ENSMUST00000208954 655 ntBASIC16.97■□□□□ 0.31
Atf6F6VAN0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6F6VAN0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.96■□□□□ 0.31
Atf6F6VAN0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Atf6F6VAN0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atf6F6VAN0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atf6F6VAN0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atf6F6VAN0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Atf6F6VAN0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Atf6F6VAN0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Atf6F6VAN0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Atf6F6VAN0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Atf6F6VAN0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Atf6F6VAN0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atf6F6VAN0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.96■□□□□ 0.31
Atf6F6VAN0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atf6F6VAN0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atf6F6VAN0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Atf6F6VAN0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atf6F6VAN0 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.96■□□□□ 0.31
Atf6F6VAN0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Atf6F6VAN0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Atf6F6VAN0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Atf6F6VAN0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Atf6F6VAN0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
Atf6F6VAN0 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.96■□□□□ 0.3
Atf6F6VAN0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Atf6F6VAN0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6F6VAN0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6F6VAN0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms