Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc149F6V035 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc149F6V035 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.78■□□□□ 0.28
Ccdc149F6V035 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc149F6V035 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc149F6V035 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc149F6V035 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc149F6V035 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc149F6V035 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Ccdc149F6V035 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc149F6V035 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc149F6V035 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.77■□□□□ 0.28
Ccdc149F6V035 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc149F6V035 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc149F6V035 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc149F6V035 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc149F6V035 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.77■□□□□ 0.28
Ccdc149F6V035 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc149F6V035 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc149F6V035 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Ccdc149F6V035 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Ccdc149F6V035 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc149F6V035 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc149F6V035 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc149F6V035 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc149F6V035 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc149F6V035 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc149F6V035 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc149F6V035 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc149F6V035 Gm12644-201ENSMUST00000119935 606 ntBASIC16.76■□□□□ 0.27
Ccdc149F6V035 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc149F6V035 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ccdc149F6V035 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc149F6V035 Gm5864-201ENSMUST00000202263 970 ntBASIC16.76■□□□□ 0.27
Ccdc149F6V035 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc149F6V035 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc149F6V035 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc149F6V035 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc149F6V035 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ccdc149F6V035 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc149F6V035 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc149F6V035 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc149F6V035 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.76■□□□□ 0.27
Ccdc149F6V035 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc149F6V035 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc149F6V035 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc149F6V035 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc149F6V035 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc149F6V035 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.75■□□□□ 0.27
Ccdc149F6V035 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ccdc149F6V035 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc149F6V035 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.75■□□□□ 0.27
Ccdc149F6V035 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc149F6V035 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc149F6V035 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc149F6V035 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc149F6V035 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc149F6V035 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc149F6V035 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc149F6V035 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc149F6V035 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ccdc149F6V035 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc149F6V035 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ccdc149F6V035 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc149F6V035 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc149F6V035 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.74■□□□□ 0.27
Ccdc149F6V035 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
Ccdc149F6V035 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc149F6V035 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.74■□□□□ 0.27
Ccdc149F6V035 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc149F6V035 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.74■□□□□ 0.27
Ccdc149F6V035 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc149F6V035 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc149F6V035 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc149F6V035 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc149F6V035 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc149F6V035 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc149F6V035 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.74■□□□□ 0.27
Ccdc149F6V035 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc149F6V035 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc149F6V035 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc149F6V035 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc149F6V035 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc149F6V035 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc149F6V035 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccdc149F6V035 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc149F6V035 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc149F6V035 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.73■□□□□ 0.27
Ccdc149F6V035 Gm44454-201ENSMUST00000198541 138 ntBASIC16.73■□□□□ 0.27
Ccdc149F6V035 Gm44771-201ENSMUST00000206975 626 ntBASIC16.73■□□□□ 0.27
Ccdc149F6V035 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.73■□□□□ 0.27
Ccdc149F6V035 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.73■□□□□ 0.27
Ccdc149F6V035 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc149F6V035 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.73■□□□□ 0.27
Ccdc149F6V035 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc149F6V035 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc149F6V035 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc149F6V035 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc149F6V035 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc149F6V035 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms