Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm1E9Q9Q2 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.2■□□□□ 0.5
R3hdm1E9Q9Q2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm1E9Q9Q2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm1E9Q9Q2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm1E9Q9Q2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm1E9Q9Q2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm1E9Q9Q2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.2■□□□□ 0.5
R3hdm1E9Q9Q2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm1E9Q9Q2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm1E9Q9Q2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
R3hdm1E9Q9Q2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm1E9Q9Q2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm1E9Q9Q2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm1E9Q9Q2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3hdm1E9Q9Q2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm1E9Q9Q2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm1E9Q9Q2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm1E9Q9Q2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm1E9Q9Q2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm1E9Q9Q2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm1E9Q9Q2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm1E9Q9Q2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
R3hdm1E9Q9Q2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
R3hdm1E9Q9Q2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm1E9Q9Q2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
R3hdm1E9Q9Q2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.19■□□□□ 0.5
R3hdm1E9Q9Q2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm1E9Q9Q2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm1E9Q9Q2 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.19■□□□□ 0.5
R3hdm1E9Q9Q2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm1E9Q9Q2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3hdm1E9Q9Q2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Gm7862-201ENSMUST00000121461 292 ntBASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Gm6296-201ENSMUST00000222599 943 ntBASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3hdm1E9Q9Q2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.17■□□□□ 0.5
R3hdm1E9Q9Q2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.16■□□□□ 0.5
R3hdm1E9Q9Q2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm1E9Q9Q2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm1E9Q9Q2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm1E9Q9Q2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm1E9Q9Q2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.16■□□□□ 0.5
R3hdm1E9Q9Q2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm1E9Q9Q2 Gm27702-201ENSMUST00000184512 56 ntBASIC18.16■□□□□ 0.5
R3hdm1E9Q9Q2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm1E9Q9Q2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm1E9Q9Q2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm1E9Q9Q2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.16■□□□□ 0.5
R3hdm1E9Q9Q2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
R3hdm1E9Q9Q2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms