Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ube4aE9Q735 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ube4aE9Q735 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.84■□□□□ 0.77
Ube4aE9Q735 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
Ube4aE9Q735 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.84■□□□□ 0.77
Ube4aE9Q735 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube4aE9Q735 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Ube4aE9Q735 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ube4aE9Q735 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube4aE9Q735 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube4aE9Q735 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube4aE9Q735 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ube4aE9Q735 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube4aE9Q735 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.83■□□□□ 0.77
Ube4aE9Q735 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ube4aE9Q735 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.83■□□□□ 0.77
Ube4aE9Q735 Gm7506-201ENSMUST00000207758 815 ntBASIC19.83■□□□□ 0.77
Ube4aE9Q735 Gm10060-201ENSMUST00000212002 111 ntBASIC19.83■□□□□ 0.77
Ube4aE9Q735 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube4aE9Q735 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ube4aE9Q735 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ube4aE9Q735 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ube4aE9Q735 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ube4aE9Q735 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ube4aE9Q735 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube4aE9Q735 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube4aE9Q735 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube4aE9Q735 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube4aE9Q735 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Ube4aE9Q735 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ube4aE9Q735 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube4aE9Q735 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube4aE9Q735 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.82■□□□□ 0.76
Ube4aE9Q735 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube4aE9Q735 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube4aE9Q735 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.82■□□□□ 0.76
Ube4aE9Q735 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube4aE9Q735 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube4aE9Q735 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube4aE9Q735 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube4aE9Q735 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.81■□□□□ 0.76
Ube4aE9Q735 Rarb-207ENSMUST00000225921 2756 ntBASIC19.81■□□□□ 0.76
Ube4aE9Q735 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube4aE9Q735 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.81■□□□□ 0.76
Ube4aE9Q735 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube4aE9Q735 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ube4aE9Q735 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube4aE9Q735 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube4aE9Q735 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube4aE9Q735 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.81■□□□□ 0.76
Ube4aE9Q735 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube4aE9Q735 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ube4aE9Q735 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube4aE9Q735 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ube4aE9Q735 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ube4aE9Q735 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ube4aE9Q735 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube4aE9Q735 Mir5131-201ENSMUST00000175426 93 ntBASIC19.8■□□□□ 0.76
Ube4aE9Q735 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ube4aE9Q735 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ube4aE9Q735 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Ube4aE9Q735 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.8■□□□□ 0.76
Ube4aE9Q735 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ube4aE9Q735 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube4aE9Q735 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ube4aE9Q735 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ube4aE9Q735 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ube4aE9Q735 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Ube4aE9Q735 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ube4aE9Q735 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Ube4aE9Q735 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube4aE9Q735 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube4aE9Q735 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.79■□□□□ 0.76
Ube4aE9Q735 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
Ube4aE9Q735 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube4aE9Q735 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube4aE9Q735 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ube4aE9Q735 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.79■□□□□ 0.76
Ube4aE9Q735 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.79■□□□□ 0.76
Ube4aE9Q735 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.79■□□□□ 0.76
Ube4aE9Q735 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube4aE9Q735 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ube4aE9Q735 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube4aE9Q735 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube4aE9Q735 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube4aE9Q735 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube4aE9Q735 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ube4aE9Q735 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.79■□□□□ 0.76
Ube4aE9Q735 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube4aE9Q735 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ube4aE9Q735 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.79■□□□□ 0.76
Ube4aE9Q735 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube4aE9Q735 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ube4aE9Q735 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube4aE9Q735 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube4aE9Q735 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube4aE9Q735 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube4aE9Q735 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.78■□□□□ 0.76
Ube4aE9Q735 Gm4535-201ENSMUST00000182274 558 ntBASIC19.78■□□□□ 0.76
Ube4aE9Q735 Gm18206-201ENSMUST00000207027 926 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms