Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.63■□□□□ 0.25
Gm28043E0CXC2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Gm28043E0CXC2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28043E0CXC2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28043E0CXC2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28043E0CXC2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28043E0CXC2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28043E0CXC2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28043E0CXC2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28043E0CXC2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28043E0CXC2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm28043E0CXC2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28043E0CXC2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28043E0CXC2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28043E0CXC2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28043E0CXC2 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28043E0CXC2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28043E0CXC2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28043E0CXC2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28043E0CXC2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Gm28043E0CXC2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Gm28043E0CXC2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.61■□□□□ 0.25
Gm28043E0CXC2 Gm24841-201ENSMUST00000158676 357 ntBASIC16.61■□□□□ 0.25
Gm28043E0CXC2 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.61■□□□□ 0.25
Gm28043E0CXC2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28043E0CXC2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28043E0CXC2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28043E0CXC2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28043E0CXC2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28043E0CXC2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28043E0CXC2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Gm28043E0CXC2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm28043E0CXC2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Gm28043E0CXC2 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28043E0CXC2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28043E0CXC2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28043E0CXC2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28043E0CXC2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28043E0CXC2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28043E0CXC2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28043E0CXC2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.6■□□□□ 0.25
Gm28043E0CXC2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28043E0CXC2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Gm28043E0CXC2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28043E0CXC2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.6■□□□□ 0.25
Gm28043E0CXC2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Gm28043E0CXC2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28043E0CXC2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Gm28043E0CXC2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28043E0CXC2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm28043E0CXC2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28043E0CXC2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Gm28043E0CXC2 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.59■□□□□ 0.25
Gm28043E0CXC2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28043E0CXC2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28043E0CXC2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Gm28043E0CXC2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28043E0CXC2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.59■□□□□ 0.25
Gm28043E0CXC2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28043E0CXC2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28043E0CXC2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Gm28043E0CXC2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Gm28043E0CXC2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28043E0CXC2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28043E0CXC2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28043E0CXC2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28043E0CXC2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28043E0CXC2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Gm28043E0CXC2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28043E0CXC2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28043E0CXC2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28043E0CXC2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28043E0CXC2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms