Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx8D3YU81 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx8D3YU81 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx8D3YU81 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rfx8D3YU81 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx8D3YU81 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx8D3YU81 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx8D3YU81 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx8D3YU81 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx8D3YU81 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.53■□□□□ 0.4
Rfx8D3YU81 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx8D3YU81 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx8D3YU81 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.52■□□□□ 0.4
Rfx8D3YU81 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx8D3YU81 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx8D3YU81 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx8D3YU81 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Rfx8D3YU81 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx8D3YU81 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.52■□□□□ 0.4
Rfx8D3YU81 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx8D3YU81 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.52■□□□□ 0.4
Rfx8D3YU81 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.52■□□□□ 0.4
Rfx8D3YU81 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.52■□□□□ 0.4
Rfx8D3YU81 Gm10566-201ENSMUST00000086739 996 ntBASIC17.52■□□□□ 0.4
Rfx8D3YU81 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.52■□□□□ 0.4
Rfx8D3YU81 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfx8D3YU81 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfx8D3YU81 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfx8D3YU81 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rfx8D3YU81 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfx8D3YU81 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfx8D3YU81 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfx8D3YU81 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfx8D3YU81 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rfx8D3YU81 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfx8D3YU81 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfx8D3YU81 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.51■□□□□ 0.39
Rfx8D3YU81 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx8D3YU81 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx8D3YU81 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx8D3YU81 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx8D3YU81 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx8D3YU81 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx8D3YU81 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx8D3YU81 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx8D3YU81 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx8D3YU81 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rfx8D3YU81 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx8D3YU81 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx8D3YU81 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rfx8D3YU81 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rfx8D3YU81 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rfx8D3YU81 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rfx8D3YU81 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx8D3YU81 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx8D3YU81 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx8D3YU81 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx8D3YU81 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.5■□□□□ 0.39
Rfx8D3YU81 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.5■□□□□ 0.39
Rfx8D3YU81 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx8D3YU81 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx8D3YU81 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx8D3YU81 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rfx8D3YU81 Phf7-203ENSMUST00000226565 1971 ntBASIC17.49■□□□□ 0.39
Rfx8D3YU81 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx8D3YU81 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx8D3YU81 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx8D3YU81 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx8D3YU81 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx8D3YU81 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx8D3YU81 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx8D3YU81 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx8D3YU81 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rfx8D3YU81 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx8D3YU81 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx8D3YU81 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.49■□□□□ 0.39
Rfx8D3YU81 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx8D3YU81 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms