Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.39□□□□□ -0.27
Chd6A3KFM7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.39□□□□□ -0.27
Chd6A3KFM7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.39□□□□□ -0.27
Chd6A3KFM7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chd6A3KFM7 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Gm5682-201ENSMUST00000173402 505 ntBASIC13.38□□□□□ -0.27
Chd6A3KFM7 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.38□□□□□ -0.27
Chd6A3KFM7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.38□□□□□ -0.27
Chd6A3KFM7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd6A3KFM7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd6A3KFM7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.37□□□□□ -0.27
Chd6A3KFM7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Chd6A3KFM7 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.37□□□□□ -0.27
Chd6A3KFM7 Gm18421-201ENSMUST00000204122 625 ntBASIC13.37□□□□□ -0.27
Chd6A3KFM7 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd6A3KFM7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd6A3KFM7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd6A3KFM7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd6A3KFM7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd6A3KFM7 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chd6A3KFM7 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chd6A3KFM7 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Chd6A3KFM7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Chd6A3KFM7 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd6A3KFM7 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd6A3KFM7 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd6A3KFM7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd6A3KFM7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd6A3KFM7 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.37□□□□□ -0.27
Chd6A3KFM7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.37□□□□□ -0.27
Chd6A3KFM7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd6A3KFM7 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chd6A3KFM7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chd6A3KFM7 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.36□□□□□ -0.27
Chd6A3KFM7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd6A3KFM7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd6A3KFM7 Gm25745-201ENSMUST00000174945 133 ntBASIC13.36□□□□□ -0.27
Chd6A3KFM7 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.36□□□□□ -0.27
Chd6A3KFM7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chd6A3KFM7 Gm44450-201ENSMUST00000199528 114 ntBASIC13.36□□□□□ -0.27
Chd6A3KFM7 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.36□□□□□ -0.27
Chd6A3KFM7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chd6A3KFM7 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd6A3KFM7 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd6A3KFM7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chd6A3KFM7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Chd6A3KFM7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chd6A3KFM7 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.36□□□□□ -0.27
Chd6A3KFM7 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.36□□□□□ -0.27
Chd6A3KFM7 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.36□□□□□ -0.27
Chd6A3KFM7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chd6A3KFM7 Gm45747-201ENSMUST00000212203 999 ntBASIC13.36□□□□□ -0.27
Chd6A3KFM7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms