Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm3854A0A1B0GSS6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm3854A0A1B0GSS6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm3854A0A1B0GSS6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm3854A0A1B0GSS6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.54■□□□□ 0.24
Gm3854A0A1B0GSS6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm3854A0A1B0GSS6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm3854A0A1B0GSS6 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm3854A0A1B0GSS6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Gm3854A0A1B0GSS6 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.54■□□□□ 0.24
Gm3854A0A1B0GSS6 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Gm3854A0A1B0GSS6 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm3854A0A1B0GSS6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Gm3854A0A1B0GSS6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm3854A0A1B0GSS6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm3854A0A1B0GSS6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Gm3854A0A1B0GSS6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm3854A0A1B0GSS6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm3854A0A1B0GSS6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm3854A0A1B0GSS6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Gm3854A0A1B0GSS6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm3854A0A1B0GSS6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3854A0A1B0GSS6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3854A0A1B0GSS6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3854A0A1B0GSS6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3854A0A1B0GSS6 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3854A0A1B0GSS6 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Gm3854A0A1B0GSS6 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.53■□□□□ 0.24
Gm3854A0A1B0GSS6 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.53■□□□□ 0.24
Gm3854A0A1B0GSS6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.53■□□□□ 0.24
Gm3854A0A1B0GSS6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3854A0A1B0GSS6 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3854A0A1B0GSS6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3854A0A1B0GSS6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3854A0A1B0GSS6 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3854A0A1B0GSS6 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3854A0A1B0GSS6 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.53■□□□□ 0.24
Gm3854A0A1B0GSS6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3854A0A1B0GSS6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3854A0A1B0GSS6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.53■□□□□ 0.24
Gm3854A0A1B0GSS6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm3854A0A1B0GSS6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Gm3854A0A1B0GSS6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Gm3854A0A1B0GSS6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Gm3854A0A1B0GSS6 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm3854A0A1B0GSS6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm3854A0A1B0GSS6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm3854A0A1B0GSS6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm3854A0A1B0GSS6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.52■□□□□ 0.24
Gm3854A0A1B0GSS6 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.52■□□□□ 0.24
Gm3854A0A1B0GSS6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm3854A0A1B0GSS6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Gm3854A0A1B0GSS6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Gm3854A0A1B0GSS6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.52■□□□□ 0.24
Gm3854A0A1B0GSS6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Gm3854A0A1B0GSS6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Gm3854A0A1B0GSS6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Gm3854A0A1B0GSS6 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Gm3854A0A1B0GSS6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Gm3854A0A1B0GSS6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Gm3854A0A1B0GSS6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Gm3854A0A1B0GSS6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Gm3854A0A1B0GSS6 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3854A0A1B0GSS6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3854A0A1B0GSS6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3854A0A1B0GSS6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.51■□□□□ 0.23
Gm3854A0A1B0GSS6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3854A0A1B0GSS6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Gm3854A0A1B0GSS6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Gm3854A0A1B0GSS6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3854A0A1B0GSS6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3854A0A1B0GSS6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3854A0A1B0GSS6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3854A0A1B0GSS6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.51■□□□□ 0.23
Gm3854A0A1B0GSS6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Gm3854A0A1B0GSS6 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Gm3854A0A1B0GSS6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Gm3854A0A1B0GSS6 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3854A0A1B0GSS6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.51■□□□□ 0.23
Gm3854A0A1B0GSS6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm3854A0A1B0GSS6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3854A0A1B0GSS6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Gm3854A0A1B0GSS6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3854A0A1B0GSS6 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3854A0A1B0GSS6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3854A0A1B0GSS6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3854A0A1B0GSS6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3854A0A1B0GSS6 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3854A0A1B0GSS6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3854A0A1B0GSS6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3854A0A1B0GSS6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3854A0A1B0GSS6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Gm3854A0A1B0GSS6 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.5■□□□□ 0.23
Gm3854A0A1B0GSS6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3854A0A1B0GSS6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm3854A0A1B0GSS6 Gm25745-201ENSMUST00000174945 133 ntBASIC16.5■□□□□ 0.23
Gm3854A0A1B0GSS6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.5■□□□□ 0.23
Gm3854A0A1B0GSS6 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.5■□□□□ 0.23
Gm3854A0A1B0GSS6 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.5■□□□□ 0.23
Gm3854A0A1B0GSS6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms