Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Gm15565-201ENSMUST00000118890 427 ntBASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcna-ps2A0A140T8V5 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pcna-ps2A0A140T8V5 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.64■□□□□ 0.26
Pcna-ps2A0A140T8V5 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcna-ps2A0A140T8V5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcna-ps2A0A140T8V5 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcna-ps2A0A140T8V5 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcna-ps2A0A140T8V5 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcna-ps2A0A140T8V5 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcna-ps2A0A140T8V5 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcna-ps2A0A140T8V5 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcna-ps2A0A140T8V5 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.64■□□□□ 0.25
Pcna-ps2A0A140T8V5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.64■□□□□ 0.25
Pcna-ps2A0A140T8V5 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pcna-ps2A0A140T8V5 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcna-ps2A0A140T8V5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcna-ps2A0A140T8V5 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcna-ps2A0A140T8V5 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcna-ps2A0A140T8V5 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcna-ps2A0A140T8V5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcna-ps2A0A140T8V5 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcna-ps2A0A140T8V5 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcna-ps2A0A140T8V5 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcna-ps2A0A140T8V5 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcna-ps2A0A140T8V5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Gm18958-201ENSMUST00000174258 762 ntBASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcna-ps2A0A140T8V5 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcna-ps2A0A140T8V5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcna-ps2A0A140T8V5 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcna-ps2A0A140T8V5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.62■□□□□ 0.25
Pcna-ps2A0A140T8V5 Gm11539-201ENSMUST00000119837 557 ntBASIC16.62■□□□□ 0.25
Pcna-ps2A0A140T8V5 Gm13436-201ENSMUST00000120418 567 ntBASIC16.62■□□□□ 0.25
Pcna-ps2A0A140T8V5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.62■□□□□ 0.25
Pcna-ps2A0A140T8V5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcna-ps2A0A140T8V5 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Pcna-ps2A0A140T8V5 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcna-ps2A0A140T8V5 Il3ra-202ENSMUST00000223589 738 ntBASIC16.62■□□□□ 0.25
Pcna-ps2A0A140T8V5 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcna-ps2A0A140T8V5 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcna-ps2A0A140T8V5 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcna-ps2A0A140T8V5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcna-ps2A0A140T8V5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcna-ps2A0A140T8V5 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcna-ps2A0A140T8V5 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcna-ps2A0A140T8V5 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcna-ps2A0A140T8V5 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcna-ps2A0A140T8V5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcna-ps2A0A140T8V5 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcna-ps2A0A140T8V5 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms