Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Gm12441-201ENSMUST00000121806 588 ntBASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Gm10517-202ENSMUST00000192970 758 ntBASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Trmt13-210ENSMUST00000198454 880 ntBASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igkv3-5A0A140T8M6 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Nrn1-203ENSMUST00000223611 1443 ntBASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Gm5421-201ENSMUST00000181698 2354 ntBASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Gm45244-201ENSMUST00000211328 2200 ntBASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Gm7292-201ENSMUST00000194706 2527 ntBASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igkv3-5A0A140T8M6 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv3-5A0A140T8M6 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv3-5A0A140T8M6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC10.41□□□□□ -0.74
Igkv3-5A0A140T8M6 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv3-5A0A140T8M6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv3-5A0A140T8M6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv3-5A0A140T8M6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv3-5A0A140T8M6 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv3-5A0A140T8M6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv3-5A0A140T8M6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Igkv3-5A0A140T8M6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Igkv3-5A0A140T8M6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv3-5A0A140T8M6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv3-5A0A140T8M6 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv3-5A0A140T8M6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv3-5A0A140T8M6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv3-5A0A140T8M6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC10.41□□□□□ -0.74
Igkv3-5A0A140T8M6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC10.41□□□□□ -0.74
Igkv3-5A0A140T8M6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv3-5A0A140T8M6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC10.41□□□□□ -0.74
Igkv3-5A0A140T8M6 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv3-5A0A140T8M6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms