Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cfap99A0A140LIX9 Olfr129-201ENSMUST00000122318 993 ntBASIC19.77■□□□□ 0.76
Cfap99A0A140LIX9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Cfap99A0A140LIX9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.77■□□□□ 0.76
Cfap99A0A140LIX9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cfap99A0A140LIX9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Cfap99A0A140LIX9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cfap99A0A140LIX9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cfap99A0A140LIX9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap99A0A140LIX9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap99A0A140LIX9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap99A0A140LIX9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap99A0A140LIX9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.76■□□□□ 0.75
Cfap99A0A140LIX9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cfap99A0A140LIX9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap99A0A140LIX9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap99A0A140LIX9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap99A0A140LIX9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Cfap99A0A140LIX9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap99A0A140LIX9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cfap99A0A140LIX9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap99A0A140LIX9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Cfap99A0A140LIX9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Cfap99A0A140LIX9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Cfap99A0A140LIX9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap99A0A140LIX9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.75■□□□□ 0.75
Cfap99A0A140LIX9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap99A0A140LIX9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap99A0A140LIX9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.75■□□□□ 0.75
Cfap99A0A140LIX9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap99A0A140LIX9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap99A0A140LIX9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap99A0A140LIX9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap99A0A140LIX9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap99A0A140LIX9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap99A0A140LIX9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cfap99A0A140LIX9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cfap99A0A140LIX9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cfap99A0A140LIX9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cfap99A0A140LIX9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.74■□□□□ 0.75
Cfap99A0A140LIX9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.74■□□□□ 0.75
Cfap99A0A140LIX9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.74■□□□□ 0.75
Cfap99A0A140LIX9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cfap99A0A140LIX9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cfap99A0A140LIX9 Birc2-201ENSMUST00000054878 378 ntBASIC19.74■□□□□ 0.75
Cfap99A0A140LIX9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cfap99A0A140LIX9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.74■□□□□ 0.75
Cfap99A0A140LIX9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cfap99A0A140LIX9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cfap99A0A140LIX9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cfap99A0A140LIX9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cfap99A0A140LIX9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cfap99A0A140LIX9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Cfap99A0A140LIX9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cfap99A0A140LIX9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Cfap99A0A140LIX9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.73■□□□□ 0.75
Cfap99A0A140LIX9 Gm34391-201ENSMUST00000203706 907 ntBASIC19.73■□□□□ 0.75
Cfap99A0A140LIX9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cfap99A0A140LIX9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cfap99A0A140LIX9 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.73■□□□□ 0.75
Cfap99A0A140LIX9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cfap99A0A140LIX9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.73■□□□□ 0.75
Cfap99A0A140LIX9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Cfap99A0A140LIX9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cfap99A0A140LIX9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cfap99A0A140LIX9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cfap99A0A140LIX9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cfap99A0A140LIX9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cfap99A0A140LIX9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cfap99A0A140LIX9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cfap99A0A140LIX9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cfap99A0A140LIX9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cfap99A0A140LIX9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cfap99A0A140LIX9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cfap99A0A140LIX9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.72■□□□□ 0.75
Cfap99A0A140LIX9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.72■□□□□ 0.75
Cfap99A0A140LIX9 Gm28659-201ENSMUST00000188013 759 ntBASIC19.72■□□□□ 0.75
Cfap99A0A140LIX9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.72■□□□□ 0.75
Cfap99A0A140LIX9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cfap99A0A140LIX9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cfap99A0A140LIX9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cfap99A0A140LIX9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cfap99A0A140LIX9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cfap99A0A140LIX9 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.72■□□□□ 0.75
Cfap99A0A140LIX9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cfap99A0A140LIX9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cfap99A0A140LIX9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cfap99A0A140LIX9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cfap99A0A140LIX9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Cfap99A0A140LIX9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cfap99A0A140LIX9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Cfap99A0A140LIX9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Cfap99A0A140LIX9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.71■□□□□ 0.75
Cfap99A0A140LIX9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.71■□□□□ 0.75
Cfap99A0A140LIX9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.71■□□□□ 0.75
Cfap99A0A140LIX9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Cfap99A0A140LIX9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cfap99A0A140LIX9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cfap99A0A140LIX9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cfap99A0A140LIX9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms