Protein–RNA interactions for Protein: A0A0U1RP99

Ino80e, INO80 complex subunit E (Fragment), mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ino80eA0A0U1RP99 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ino80eA0A0U1RP99 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ino80eA0A0U1RP99 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ino80eA0A0U1RP99 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ino80eA0A0U1RP99 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Ino80eA0A0U1RP99 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ino80eA0A0U1RP99 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ino80eA0A0U1RP99 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ino80eA0A0U1RP99 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Ino80eA0A0U1RP99 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ino80eA0A0U1RP99 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ino80eA0A0U1RP99 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ino80eA0A0U1RP99 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ino80eA0A0U1RP99 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ino80eA0A0U1RP99 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ino80eA0A0U1RP99 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ino80eA0A0U1RP99 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ino80eA0A0U1RP99 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ino80eA0A0U1RP99 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.67□□□□□ -0.22
Ino80eA0A0U1RP99 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ino80eA0A0U1RP99 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ino80eA0A0U1RP99 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ino80eA0A0U1RP99 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms