Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav23A0A0G2JG17 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav23A0A0G2JG17 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Trav23A0A0G2JG17 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav23A0A0G2JG17 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Trav23A0A0G2JG17 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav23A0A0G2JG17 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav23A0A0G2JG17 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav23A0A0G2JG17 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav23A0A0G2JG17 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Gm7370-201ENSMUST00000219471 767 ntBASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav23A0A0G2JG17 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav23A0A0G2JG17 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms