Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13n-1A0A0G2JEU8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.02□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13n-1A0A0G2JEU8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gm21362-201ENSMUST00000194272 928 ntBASIC12.02□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gm25016-201ENSMUST00000158399 131 ntBASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav13n-1A0A0G2JEU8 Gm14859-201ENSMUST00000117752 357 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms