Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.02□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trav9n-2A0A0G2JDP3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms