Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Trav4-3A0A0B4J1K1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav4-3A0A0B4J1K1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Gm42778-201ENSMUST00000199644 553 ntBASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms