Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv20A0A0B4J1H5 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv20A0A0B4J1H5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv20A0A0B4J1H5 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv20A0A0B4J1H5 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv20A0A0B4J1H5 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv20A0A0B4J1H5 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.88□□□□□ -0.03
Trbv20A0A0B4J1H5 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv20A0A0B4J1H5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv20A0A0B4J1H5 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv20A0A0B4J1H5 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv20A0A0B4J1H5 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv20A0A0B4J1H5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv20A0A0B4J1H5 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv20A0A0B4J1H5 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv20A0A0B4J1H5 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv20A0A0B4J1H5 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv20A0A0B4J1H5 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv20A0A0B4J1H5 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv20A0A0B4J1H5 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv20A0A0B4J1H5 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv20A0A0B4J1H5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv20A0A0B4J1H5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv20A0A0B4J1H5 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trbv20A0A0B4J1H5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv20A0A0B4J1H5 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv20A0A0B4J1H5 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv20A0A0B4J1H5 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv20A0A0B4J1H5 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv20A0A0B4J1H5 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv20A0A0B4J1H5 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.86□□□□□ -0.03
Trbv20A0A0B4J1H5 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv20A0A0B4J1H5 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trbv20A0A0B4J1H5 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.86□□□□□ -0.03
Trbv20A0A0B4J1H5 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv20A0A0B4J1H5 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv20A0A0B4J1H5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv20A0A0B4J1H5 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trbv20A0A0B4J1H5 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv20A0A0B4J1H5 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv20A0A0B4J1H5 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv20A0A0B4J1H5 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv20A0A0B4J1H5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv20A0A0B4J1H5 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trbv20A0A0B4J1H5 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv20A0A0B4J1H5 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv20A0A0B4J1H5 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv20A0A0B4J1H5 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv20A0A0B4J1H5 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms