Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.26■□□□□ 0.03
Ighv1-43A0A0A6YXN5 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.26■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.26■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-43A0A0A6YXN5 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-43A0A0A6YXN5 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-43A0A0A6YXN5 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.25■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.25■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.25■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.25■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Gm27459-201ENSMUST00000184860 107 ntBASIC15.23■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.23■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-43A0A0A6YXN5 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms