Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12d-3A0A075B6A4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-3A0A075B6A4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav12d-3A0A075B6A4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Trav12d-3A0A075B6A4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Trav12d-3A0A075B6A4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trav12d-3A0A075B6A4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Gm43173-201ENSMUST00000202246 593 ntBASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-3A0A075B6A4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms