Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Dancr-204ENSMUST00000132389 2347 ntBASIC13.58□□□□□ -0.24
Trav18A0A075B656 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav18A0A075B656 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.57□□□□□ -0.24
Trav18A0A075B656 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav18A0A075B656 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav18A0A075B656 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.56□□□□□ -0.24
Trav18A0A075B656 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav18A0A075B656 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.56□□□□□ -0.24
Trav18A0A075B656 Timm23-208ENSMUST00000226683 750 ntBASIC13.56□□□□□ -0.24
Trav18A0A075B656 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.56□□□□□ -0.24
Trav18A0A075B656 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav18A0A075B656 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav18A0A075B656 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Trav18A0A075B656 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav18A0A075B656 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.55□□□□□ -0.24
Trav18A0A075B656 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav18A0A075B656 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms