Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Trav5-4A0A075B652 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav5-4A0A075B652 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-4A0A075B652 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.84□□□□□ -0.19
Trav5-4A0A075B652 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-4A0A075B652 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.84□□□□□ -0.19
Trav5-4A0A075B652 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-4A0A075B652 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-4A0A075B652 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-4A0A075B652 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav5-4A0A075B652 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-4A0A075B652 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav5-4A0A075B652 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav5-4A0A075B652 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-4A0A075B652 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-4A0A075B652 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav5-4A0A075B652 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trav5-4A0A075B652 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trav5-4A0A075B652 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav5-4A0A075B652 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Gm18958-201ENSMUST00000174258 762 ntBASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-4A0A075B652 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Gm715-201ENSMUST00000117865 831 ntBASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Gm27000-201ENSMUST00000182943 842 ntBASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Il3ra-202ENSMUST00000223589 738 ntBASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Gm10812-201ENSMUST00000099864 546 ntBASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav5-4A0A075B652 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Gm22240-201ENSMUST00000175225 82 ntBASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav5-4A0A075B652 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms