Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Gm43017-201ENSMUST00000198296 752 ntBASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Gm43060-201ENSMUST00000200621 289 ntBASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 CT010467.1-202ENSMUST00000205406 714 ntBASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav8-1A0A075B641 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav8-1A0A075B641 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav8-1A0A075B641 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms