Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.67□□□□□ -0.06
Trav6-7-dv9A0A075B639 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.67□□□□□ -0.06
Trav6-7-dv9A0A075B639 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav6-7-dv9A0A075B639 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-7-dv9A0A075B639 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-7-dv9A0A075B639 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-7-dv9A0A075B639 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-7-dv9A0A075B639 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav6-7-dv9A0A075B639 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Trav6-7-dv9A0A075B639 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-7-dv9A0A075B639 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-7-dv9A0A075B639 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-7-dv9A0A075B639 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-7-dv9A0A075B639 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 Gm7370-201ENSMUST00000219471 767 ntBASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-7-dv9A0A075B639 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
Trav6-7-dv9A0A075B639 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.65□□□□□ -0.07
Trav6-7-dv9A0A075B639 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-7-dv9A0A075B639 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6-7-dv9A0A075B639 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms