Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Gm18666-201ENSMUST00000190039 958 ntBASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.1□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Gm10602-201ENSMUST00000098239 609 ntBASIC14.1□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav15d-1-dv6d-1A0A075B624 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms