Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6n-5A0A075B621 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6n-5A0A075B621 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6n-5A0A075B621 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
Trav6n-5A0A075B621 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.83□□□□□ -0.35
Trav6n-5A0A075B621 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav6n-5A0A075B621 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.83□□□□□ -0.35
Trav6n-5A0A075B621 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.83□□□□□ -0.35
Trav6n-5A0A075B621 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.83□□□□□ -0.35
Trav6n-5A0A075B621 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav6n-5A0A075B621 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav6n-5A0A075B621 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms