Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv4A0A075B5I2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 Gm26039-201ENSMUST00000158152 144 ntBASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 Mir6982-201ENSMUST00000184354 68 ntBASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Trbv4A0A075B5I2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv4A0A075B5I2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv4A0A075B5I2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv4A0A075B5I2 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.58■□□□□ 0.24
Trbv4A0A075B5I2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.58■□□□□ 0.24
Trbv4A0A075B5I2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv4A0A075B5I2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv4A0A075B5I2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trbv4A0A075B5I2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv4A0A075B5I2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv4A0A075B5I2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv4A0A075B5I2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv4A0A075B5I2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv4A0A075B5I2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trbv4A0A075B5I2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.58■□□□□ 0.24
Trbv4A0A075B5I2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv4A0A075B5I2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv4A0A075B5I2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv4A0A075B5I2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv4A0A075B5I2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.58■□□□□ 0.24
Trbv4A0A075B5I2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv4A0A075B5I2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv4A0A075B5I2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.57■□□□□ 0.24
Trbv4A0A075B5I2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trbv4A0A075B5I2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Trbv4A0A075B5I2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv4A0A075B5I2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv4A0A075B5I2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv4A0A075B5I2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.56■□□□□ 0.24
Trbv4A0A075B5I2 Gm6433-201ENSMUST00000118634 875 ntBASIC16.56■□□□□ 0.24
Trbv4A0A075B5I2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trbv4A0A075B5I2 Gm29707-201ENSMUST00000196325 491 ntBASIC16.56■□□□□ 0.24
Trbv4A0A075B5I2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv4A0A075B5I2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv4A0A075B5I2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv4A0A075B5I2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.56■□□□□ 0.24
Trbv4A0A075B5I2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv4A0A075B5I2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv4A0A075B5I2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv4A0A075B5I2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.56■□□□□ 0.24
Trbv4A0A075B5I2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv4A0A075B5I2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms