Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 RNU6-543P-201ENST00000362576 108 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AC068538.1-201ENST00000376856 336 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 HMGB3P18-201ENST00000406327 590 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AC092745.2-202ENST00000411880 369 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AL445183.3-201ENST00000414168 502 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 MFSD13B-201ENST00000420133 1290 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 GAPDHP49-201ENST00000421421 961 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 EIF1P3-201ENST00000423841 334 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AL157831.1-201ENST00000426134 473 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 ELOCP11-201ENST00000436690 332 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AL512326.1-201ENST00000443050 721 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 ELOCP16-201ENST00000444494 332 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 MOB1AP2-201ENST00000446060 614 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AL035407.2-201ENST00000454090 378 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AC083829.1-201ENST00000503756 657 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AC010374.1-201ENST00000503762 1237 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AC006064.5-201ENST00000541782 248 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 EIF1P6-201ENST00000600054 334 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AL392112.1-201ENST00000605115 829 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 MLECP1-201ENST00000615893 709 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AC006338.2-201ENST00000616864 791 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AL445363.3-201ENST00000623080 671 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AC011944.2-201ENST00000624440 683 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AP000843.1-201ENST00000624880 701 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AC055839.1-201ENST00000634467 498 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AC012020.1-201ENST00000624541 1728 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 AL158163.1-201ENST00000603915 1649 ntBASIC4.06□□□□□ -1.76
ATG4BQ9Y4P1 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AC083899.2-201ENST00000423285 1376 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AC105074.1-201ENST00000623380 3095 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 ENSAP3-201ENST00000312710 333 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 RNA5SP27-201ENST00000363839 119 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AL049693.1-201ENST00000402760 611 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 MIR1303-201ENST00000408625 86 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AL161631.1-201ENST00000417933 486 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 MTCO1P43-201ENST00000431831 488 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 PRELID3BP10-201ENST00000431957 584 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AC091390.1-201ENST00000433904 331 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 RPS3AP54-201ENST00000435535 734 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 FABP5P3-201ENST00000437960 408 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AC096992.1-201ENST00000459808 709 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 RPL5P30-201ENST00000465511 891 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 RN7SL303P-201ENST00000469773 251 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AC109327.1-201ENST00000471666 403 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AC104689.1-201ENST00000473356 768 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AC104164.2-201ENST00000496953 495 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 OR5H3P-201ENST00000502817 919 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AC008565.1-201ENST00000509046 885 ntBASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.05□□□□□ -1.76
ATG4BQ9Y4P1 AC008494.2-201ENST00000514544 370 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms