Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHANK2Q9UPX8 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHANK2Q9UPX8 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SHANK2Q9UPX8 RHOT1P2-201ENST00000366423 333 ntBASIC5.47□□□□□ -1.53
SHANK2Q9UPX8 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SHANK2Q9UPX8 UBA52P6-201ENST00000399822 382 ntBASIC5.47□□□□□ -1.53
SHANK2Q9UPX8 HMGB3P20-201ENST00000417997 600 ntBASIC5.47□□□□□ -1.53
SHANK2Q9UPX8 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.47□□□□□ -1.53
SHANK2Q9UPX8 HIGD1AP12-201ENST00000427832 281 ntBASIC5.47□□□□□ -1.53
SHANK2Q9UPX8 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.47□□□□□ -1.53
SHANK2Q9UPX8 AC098824.1-201ENST00000453565 980 ntBASIC5.47□□□□□ -1.53
SHANK2Q9UPX8 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.47□□□□□ -1.53
SHANK2Q9UPX8 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.47□□□□□ -1.53
SHANK2Q9UPX8 MRPS35P3-201ENST00000603189 709 ntBASIC5.47□□□□□ -1.53
SHANK2Q9UPX8 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.47□□□□□ -1.53
SHANK2Q9UPX8 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.47□□□□□ -1.53
SHANK2Q9UPX8 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC5.47□□□□□ -1.53
SHANK2Q9UPX8 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
SHANK2Q9UPX8 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC5.47□□□□□ -1.53
SHANK2Q9UPX8 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
SHANK2Q9UPX8 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHANK2Q9UPX8 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC5.47□□□□□ -1.53
SHANK2Q9UPX8 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
SHANK2Q9UPX8 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SHANK2Q9UPX8 AC073063.1-201ENST00000434352 607 ntBASIC5.46□□□□□ -1.53
SHANK2Q9UPX8 RPL12P46-201ENST00000436610 195 ntBASIC5.46□□□□□ -1.53
SHANK2Q9UPX8 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.46□□□□□ -1.53
SHANK2Q9UPX8 AL645931.1-201ENST00000439737 410 ntBASIC5.46□□□□□ -1.53
SHANK2Q9UPX8 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SHANK2Q9UPX8 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.46□□□□□ -1.53
SHANK2Q9UPX8 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.46□□□□□ -1.53
SHANK2Q9UPX8 MIR4325-201ENST00000583049 90 ntBASIC5.46□□□□□ -1.53
SHANK2Q9UPX8 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.46□□□□□ -1.53
SHANK2Q9UPX8 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SHANK2Q9UPX8 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHANK2Q9UPX8 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHANK2Q9UPX8 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHANK2Q9UPX8 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SHANK2Q9UPX8 AC139426.3-201ENST00000605648 2059 ntBASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 SDCBPP2-201ENST00000424643 885 ntBASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 ATP5HP2-201ENST00000433885 485 ntBASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 RNA5SP154-201ENST00000516193 111 ntBASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 AC010653.1-201ENST00000571108 881 ntBASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 AC069209.1-201ENST00000619282 651 ntBASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 AC245054.1-201ENST00000420944 258 ntBASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 OSTCP5-201ENST00000425293 453 ntBASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 AC005019.1-201ENST00000436455 431 ntBASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 AC025518.1-201ENST00000479856 347 ntBASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 ASNSP4-201ENST00000511103 447 ntBASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.45□□□□□ -1.54
SHANK2Q9UPX8 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 AC139713.2-215ENST00000641428 5037 ntBASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 RPS15AP29-201ENST00000445539 400 ntBASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 RPS3AP14-201ENST00000483907 780 ntBASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 AC004069.2-201ENST00000505438 1114 ntBASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 AC109458.1-201ENST00000508858 316 ntBASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 SUMO2P20-201ENST00000520803 283 ntBASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 PCA3_2.1-201ENST00000612507 409 ntBASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 AC138627.1-204ENST00000641894 765 ntBASIC5.44□□□□□ -1.54
SHANK2Q9UPX8 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SHANK2Q9UPX8 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SHANK2Q9UPX8 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SHANK2Q9UPX8 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SHANK2Q9UPX8 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SHANK2Q9UPX8 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHANK2Q9UPX8 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms