Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RPS20P25-201ENST00000412447 352 ntBASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 AC048351.1-201ENST00000420064 602 ntBASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 AL391219.1-201ENST00000422570 483 ntBASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 OR5BE1P-201ENST00000425977 939 ntBASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 FABP5P6-201ENST00000510588 409 ntBASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 AC135001.1-201ENST00000544546 283 ntBASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 AC084757.1-201ENST00000559987 490 ntBASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 AC110743.1-201ENST00000584870 478 ntBASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 MIR5684-201ENST00000585074 65 ntBASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 PSMA6P4-201ENST00000603247 718 ntBASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 AC025946.2-201ENST00000603398 234 ntBASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 AC064801.1-201ENST00000612025 407 ntBASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 AC104820.1-201ENST00000624183 307 ntBASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 OR5BE1P-202ENST00000641168 1176 ntBASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP2Q9UDT6 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 RPL26P37-201ENST00000411983 438 ntBASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 RPL36AP36-201ENST00000418616 301 ntBASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 RPL7P2-201ENST00000427639 268 ntBASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 TBCAP1-201ENST00000436520 327 ntBASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 AL353898.1-201ENST00000444055 238 ntBASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 AL359073.1-201ENST00000448036 403 ntBASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 VN1R105P-201ENST00000486595 910 ntBASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 MTND4LP31-201ENST00000514859 294 ntBASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 RNU6-760P-201ENST00000516078 97 ntBASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 AC025627.2-201ENST00000576220 160 ntBASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 MIR1254-2-201ENST00000579553 63 ntBASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 MIR3908-201ENST00000579798 126 ntBASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 AC012417.1-201ENST00000582307 1039 ntBASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 AL606490.9-201ENST00000603331 271 ntBASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 MIR6868-201ENST00000611215 58 ntBASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP2Q9UDT6 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 SNORA60-201ENST00000362396 134 ntBASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 AL445189.1-201ENST00000405722 338 ntBASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 AL691449.1-201ENST00000426570 421 ntBASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 RPS29P7-201ENST00000439662 171 ntBASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 RPL36AP13-201ENST00000457490 317 ntBASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 AC092691.2-201ENST00000461787 803 ntBASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 RPS4XP15-201ENST00000489210 795 ntBASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 AC110792.1-201ENST00000491826 472 ntBASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 RPL29P14-201ENST00000495837 428 ntBASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 AC146944.2-203ENST00000502493 354 ntBASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 AC021087.2-201ENST00000504656 1203 ntBASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 AC139495.1-202ENST00000513164 354 ntBASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 AC034105.4-201ENST00000568304 277 ntBASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 RN7SL703P-201ENST00000578485 302 ntBASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 AC114878.2-201ENST00000604863 1251 ntBASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 AC007423.1-201ENST00000605009 627 ntBASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 MIR7702-201ENST00000621931 59 ntBASIC4.76□□□□□ -1.65
CLIP2Q9UDT6 MIR6500-201ENST00000622700 86 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms