Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 RNA5SP317-201ENST00000410176 116 ntBASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 RNA5SP311-201ENST00000411290 116 ntBASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 UBE2V2P1-201ENST00000434717 398 ntBASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AL133372.1-201ENST00000493565 745 ntBASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 CCNHP1-201ENST00000513311 678 ntBASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AC108064.1-201ENST00000513791 460 ntBASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 RNA5SP315-201ENST00000516340 116 ntBASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 RNA5SP312-201ENST00000517068 116 ntBASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 MRPL49P2-201ENST00000521066 465 ntBASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AC025857.1-201ENST00000525252 377 ntBASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 MED28P5-201ENST00000528254 438 ntBASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 RFPL1S-203ENST00000539579 330 ntBASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AC141257.3-201ENST00000572906 215 ntBASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 MIR92B-201ENST00000607575 96 ntBASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AC016911.1-201ENST00000613297 452 ntBASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AL591424.2-201ENST00000617023 128 ntBASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AL645927.2-201ENST00000618350 349 ntBASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AL161637.1-201ENST00000622380 412 ntBASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AC090506.2-201ENST00000624521 419 ntBASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 AC073073.2-201ENST00000609827 2578 ntBASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 LINC00561-201ENST00000565815 2738 ntBASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 MIR372-201ENST00000362225 67 ntBASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 OR4C10P-201ENST00000434991 931 ntBASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 Z95327.1-201ENST00000446082 482 ntBASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 RPL7P31-201ENST00000450192 724 ntBASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 RPL5P32-201ENST00000454085 879 ntBASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 UBDP1-202ENST00000457888 382 ntBASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 AC020593.1-201ENST00000507399 299 ntBASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 MTND2P31-201ENST00000512602 616 ntBASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 OR8R1P-201ENST00000543943 764 ntBASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 AC034105.4-201ENST00000568304 277 ntBASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 AC010680.3-201ENST00000604215 520 ntBASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 AC010200.2-201ENST00000605098 235 ntBASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 BNIP3P7-201ENST00000605641 516 ntBASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 uc_338.32-201ENST00000615087 172 ntBASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 AL391597.1-201ENST00000618707 694 ntBASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 RNA5SP196-201ENST00000625967 102 ntBASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 OR5AC4P-202ENST00000642086 985 ntBASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 AC027290.2-201ENST00000623210 18662 ntBASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.55□□□□□ -1.84
RSPO3Q9BXY4 Z82217.1-201ENST00000625157 8149 ntBASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RSPO3Q9BXY4 AC106871.1-201ENST00000568324 3102 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms