Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.78□□□□□ -1.8
COL21A1Q96P44 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.78□□□□□ -1.8
COL21A1Q96P44 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.78□□□□□ -1.8
COL21A1Q96P44 RSL24D1P6-201ENST00000426934 401 ntBASIC3.78□□□□□ -1.8
COL21A1Q96P44 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.78□□□□□ -1.8
COL21A1Q96P44 AL358472.1-201ENST00000431295 329 ntBASIC3.78□□□□□ -1.8
COL21A1Q96P44 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.78□□□□□ -1.8
COL21A1Q96P44 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.78□□□□□ -1.8
COL21A1Q96P44 AL353898.1-201ENST00000444055 238 ntBASIC3.78□□□□□ -1.8
COL21A1Q96P44 RNU7-27P-201ENST00000459281 62 ntBASIC3.78□□□□□ -1.8
COL21A1Q96P44 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.78□□□□□ -1.8
COL21A1Q96P44 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.78□□□□□ -1.8
COL21A1Q96P44 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.78□□□□□ -1.8
COL21A1Q96P44 AC106872.2-201ENST00000494303 480 ntBASIC3.78□□□□□ -1.8
COL21A1Q96P44 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.78□□□□□ -1.8
COL21A1Q96P44 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.78□□□□□ -1.8
COL21A1Q96P44 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.78□□□□□ -1.8
COL21A1Q96P44 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.78□□□□□ -1.8
COL21A1Q96P44 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COL21A1Q96P44 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.78□□□□□ -1.8
COL21A1Q96P44 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.78□□□□□ -1.8
COL21A1Q96P44 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COL21A1Q96P44 AC136624.4-201ENST00000573044 370 ntBASIC3.78□□□□□ -1.8
COL21A1Q96P44 MIR5684-201ENST00000585074 65 ntBASIC3.78□□□□□ -1.8
COL21A1Q96P44 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.78□□□□□ -1.8
COL21A1Q96P44 AC090953.1-201ENST00000604305 1092 ntBASIC3.78□□□□□ -1.8
COL21A1Q96P44 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.78□□□□□ -1.8
COL21A1Q96P44 AC011472.4-201ENST00000615848 491 ntBASIC3.78□□□□□ -1.8
COL21A1Q96P44 MIR492-201ENST00000638676 116 ntBASIC3.78□□□□□ -1.8
COL21A1Q96P44 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
COL21A1Q96P44 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL21A1Q96P44 NCAPGP1-201ENST00000505112 1814 ntBASIC3.78□□□□□ -1.8
COL21A1Q96P44 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.78□□□□□ -1.8
COL21A1Q96P44 AC114546.3-201ENST00000623582 1734 ntBASIC3.78□□□□□ -1.8
COL21A1Q96P44 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
COL21A1Q96P44 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL21A1Q96P44 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.78□□□□□ -1.8
COL21A1Q96P44 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
COL21A1Q96P44 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL21A1Q96P44 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL21A1Q96P44 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL21A1Q96P44 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.77□□□□□ -1.81
COL21A1Q96P44 Y_RNA.126-201ENST00000363382 111 ntBASIC3.77□□□□□ -1.81
COL21A1Q96P44 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL21A1Q96P44 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.77□□□□□ -1.81
COL21A1Q96P44 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL21A1Q96P44 HSPE1P12-201ENST00000412576 301 ntBASIC3.77□□□□□ -1.81
COL21A1Q96P44 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.77□□□□□ -1.81
COL21A1Q96P44 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.77□□□□□ -1.81
COL21A1Q96P44 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.77□□□□□ -1.81
COL21A1Q96P44 AC114755.5-201ENST00000447760 831 ntBASIC3.77□□□□□ -1.81
COL21A1Q96P44 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.77□□□□□ -1.81
COL21A1Q96P44 RPS7P7-201ENST00000463499 571 ntBASIC3.77□□□□□ -1.81
COL21A1Q96P44 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.77□□□□□ -1.81
COL21A1Q96P44 BTF3L4P4-201ENST00000506381 449 ntBASIC3.77□□□□□ -1.81
COL21A1Q96P44 AC005798.1-201ENST00000513715 387 ntBASIC3.77□□□□□ -1.81
COL21A1Q96P44 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL21A1Q96P44 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL21A1Q96P44 VTA1P2-201ENST00000520205 911 ntBASIC3.77□□□□□ -1.81
COL21A1Q96P44 MTND1P6-201ENST00000523621 946 ntBASIC3.77□□□□□ -1.81
COL21A1Q96P44 SMARCE1P4-201ENST00000523647 241 ntBASIC3.77□□□□□ -1.81
COL21A1Q96P44 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.77□□□□□ -1.81
COL21A1Q96P44 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.77□□□□□ -1.81
COL21A1Q96P44 AC135001.1-201ENST00000544546 283 ntBASIC3.77□□□□□ -1.81
COL21A1Q96P44 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.77□□□□□ -1.81
COL21A1Q96P44 AC025627.2-201ENST00000576220 160 ntBASIC3.77□□□□□ -1.81
COL21A1Q96P44 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.77□□□□□ -1.81
COL21A1Q96P44 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.77□□□□□ -1.81
COL21A1Q96P44 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.77□□□□□ -1.81
COL21A1Q96P44 MIR7151-201ENST00000617477 60 ntBASIC3.77□□□□□ -1.81
COL21A1Q96P44 AC067852.7-201ENST00000623270 535 ntBASIC3.77□□□□□ -1.81
COL21A1Q96P44 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.77□□□□□ -1.81
COL21A1Q96P44 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL21A1Q96P44 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL21A1Q96P44 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
COL21A1Q96P44 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
COL21A1Q96P44 AL359715.4-201ENST00000606629 1436 ntBASIC3.77□□□□□ -1.81
COL21A1Q96P44 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
COL21A1Q96P44 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL21A1Q96P44 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.76□□□□□ -1.81
COL21A1Q96P44 IPO8P1-201ENST00000455509 3109 ntBASIC3.76□□□□□ -1.81
COL21A1Q96P44 Z73965.1-201ENST00000623412 2297 ntBASIC3.76□□□□□ -1.81
COL21A1Q96P44 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
COL21A1Q96P44 RNU4-31P-201ENST00000384211 141 ntBASIC3.76□□□□□ -1.81
COL21A1Q96P44 AL138878.1-201ENST00000405131 347 ntBASIC3.76□□□□□ -1.81
COL21A1Q96P44 DHFRP5-201ENST00000406944 564 ntBASIC3.76□□□□□ -1.81
COL21A1Q96P44 MIR1251-201ENST00000408552 70 ntBASIC3.76□□□□□ -1.81
COL21A1Q96P44 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.76□□□□□ -1.81
COL21A1Q96P44 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.76□□□□□ -1.81
COL21A1Q96P44 AL445528.1-201ENST00000426330 420 ntBASIC3.76□□□□□ -1.81
COL21A1Q96P44 IFNNP1-201ENST00000429219 553 ntBASIC3.76□□□□□ -1.81
COL21A1Q96P44 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.76□□□□□ -1.81
COL21A1Q96P44 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.76□□□□□ -1.81
COL21A1Q96P44 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.76□□□□□ -1.81
COL21A1Q96P44 RPS4XP4-201ENST00000443195 763 ntBASIC3.76□□□□□ -1.81
COL21A1Q96P44 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.76□□□□□ -1.81
COL21A1Q96P44 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.76□□□□□ -1.81
COL21A1Q96P44 AC092691.2-201ENST00000461787 803 ntBASIC3.76□□□□□ -1.81
COL21A1Q96P44 MTND6P6-201ENST00000478031 263 ntBASIC3.76□□□□□ -1.81
COL21A1Q96P44 RN7SL271P-201ENST00000487601 295 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms