Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.77□□□□□ -1.65
SNED1Q8TER0 AC084824.5-201ENST00000612009 413 ntBASIC4.77□□□□□ -1.65
SNED1Q8TER0 AC090246.1-201ENST00000616499 426 ntBASIC4.77□□□□□ -1.65
SNED1Q8TER0 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.77□□□□□ -1.65
SNED1Q8TER0 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNED1Q8TER0 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.77□□□□□ -1.65
SNED1Q8TER0 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SNED1Q8TER0 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNED1Q8TER0 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SNED1Q8TER0 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.77□□□□□ -1.65
SNED1Q8TER0 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.77□□□□□ -1.65
SNED1Q8TER0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.77□□□□□ -1.65
SNED1Q8TER0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SNED1Q8TER0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNED1Q8TER0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.76□□□□□ -1.65
SNED1Q8TER0 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.76□□□□□ -1.65
SNED1Q8TER0 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNED1Q8TER0 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.76□□□□□ -1.65
SNED1Q8TER0 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNED1Q8TER0 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNED1Q8TER0 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNED1Q8TER0 IL6STP1-201ENST00000346911 1020 ntBASIC4.76□□□□□ -1.65
SNED1Q8TER0 RNU4-23P-201ENST00000362839 140 ntBASIC4.76□□□□□ -1.65
SNED1Q8TER0 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNED1Q8TER0 ATP5F1P6-201ENST00000402768 767 ntBASIC4.76□□□□□ -1.65
SNED1Q8TER0 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.76□□□□□ -1.65
SNED1Q8TER0 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.76□□□□□ -1.65
SNED1Q8TER0 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.76□□□□□ -1.65
SNED1Q8TER0 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.76□□□□□ -1.65
SNED1Q8TER0 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.76□□□□□ -1.65
SNED1Q8TER0 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.76□□□□□ -1.65
SNED1Q8TER0 MTCYBP11-201ENST00000447254 1109 ntBASIC4.76□□□□□ -1.65
SNED1Q8TER0 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.76□□□□□ -1.65
SNED1Q8TER0 AC015908.1-201ENST00000478739 476 ntBASIC4.76□□□□□ -1.65
SNED1Q8TER0 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.76□□□□□ -1.65
SNED1Q8TER0 AP001960.1-201ENST00000506494 658 ntBASIC4.76□□□□□ -1.65
SNED1Q8TER0 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.76□□□□□ -1.65
SNED1Q8TER0 AC007458.1-201ENST00000542812 373 ntBASIC4.76□□□□□ -1.65
SNED1Q8TER0 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.76□□□□□ -1.65
SNED1Q8TER0 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.76□□□□□ -1.65
SNED1Q8TER0 NPM1P47-201ENST00000560843 856 ntBASIC4.76□□□□□ -1.65
SNED1Q8TER0 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.76□□□□□ -1.65
SNED1Q8TER0 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.76□□□□□ -1.65
SNED1Q8TER0 AC012417.1-201ENST00000582307 1039 ntBASIC4.76□□□□□ -1.65
SNED1Q8TER0 AC104763.3-201ENST00000613765 618 ntBASIC4.76□□□□□ -1.65
SNED1Q8TER0 AC026368.1-201ENST00000614934 690 ntBASIC4.76□□□□□ -1.65
SNED1Q8TER0 AC243756.2-201ENST00000618406 463 ntBASIC4.76□□□□□ -1.65
SNED1Q8TER0 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.76□□□□□ -1.65
SNED1Q8TER0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNED1Q8TER0 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.76□□□□□ -1.65
SNED1Q8TER0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
SNED1Q8TER0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNED1Q8TER0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 AL022311.1-201ENST00000623726 19416 ntBASIC4.75□□□□□ -1.65
SNED1Q8TER0 MTND5P1-201ENST00000445440 1375 ntBASIC4.75□□□□□ -1.65
SNED1Q8TER0 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 AL356274.2-201ENST00000624379 3752 ntBASIC4.75□□□□□ -1.65
SNED1Q8TER0 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNED1Q8TER0 RN7SKP74-201ENST00000362849 309 ntBASIC4.75□□□□□ -1.65
SNED1Q8TER0 SNORD35B-201ENST00000363660 87 ntBASIC4.75□□□□□ -1.65
SNED1Q8TER0 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 MIR490-201ENST00000384865 128 ntBASIC4.75□□□□□ -1.65
SNED1Q8TER0 AL035423.1-201ENST00000420331 213 ntBASIC4.75□□□□□ -1.65
SNED1Q8TER0 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 MTCO2P17-201ENST00000424336 677 ntBASIC4.75□□□□□ -1.65
SNED1Q8TER0 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 MTND2P2-201ENST00000434633 945 ntBASIC4.75□□□□□ -1.65
SNED1Q8TER0 RAD1P2-201ENST00000446414 663 ntBASIC4.75□□□□□ -1.65
SNED1Q8TER0 AC006517.1-201ENST00000480485 328 ntBASIC4.75□□□□□ -1.65
SNED1Q8TER0 SETP14-201ENST00000497538 873 ntBASIC4.75□□□□□ -1.65
SNED1Q8TER0 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 AC093801.2-201ENST00000503966 1050 ntBASIC4.75□□□□□ -1.65
SNED1Q8TER0 AC025554.1-201ENST00000505641 188 ntBASIC4.75□□□□□ -1.65
SNED1Q8TER0 AC026427.2-201ENST00000506228 536 ntBASIC4.75□□□□□ -1.65
SNED1Q8TER0 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNED1Q8TER0 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 AC025857.1-201ENST00000525252 377 ntBASIC4.75□□□□□ -1.65
SNED1Q8TER0 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNED1Q8TER0 MTND5P21-201ENST00000531961 522 ntBASIC4.75□□□□□ -1.65
SNED1Q8TER0 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 AC245884.10-201ENST00000597355 337 ntBASIC4.75□□□□□ -1.65
SNED1Q8TER0 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 AL356490.1-201ENST00000623079 479 ntBASIC4.75□□□□□ -1.65
SNED1Q8TER0 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 AC058791.1-201ENST00000608412 3198 ntBASIC4.75□□□□□ -1.65
SNED1Q8TER0 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
SNED1Q8TER0 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms