Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 GJA6P-201ENST00000415117 1042 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AL513175.1-201ENST00000431492 780 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AL590103.1-201ENST00000434488 307 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AC129850.1-201ENST00000436203 508 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AL772161.1-201ENST00000439130 476 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 MTND2P19-201ENST00000449129 1012 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 RPL12P26-201ENST00000452430 487 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AC091685.2-201ENST00000454924 864 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 RPS23P1-201ENST00000491662 432 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AC011352.3-201ENST00000505162 593 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AP001922.4-201ENST00000526967 290 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AC007954.1-201ENST00000554198 494 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AC018552.1-201ENST00000562099 811 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 MIR4700-201ENST00000578311 74 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AC115085.1-201ENST00000588924 229 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 VN1R92P-201ENST00000598511 928 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AP000811.1-201ENST00000603803 651 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AC091488.1-201ENST00000604239 660 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AC005962.2-201ENST00000611427 652 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AL049539.1-201ENST00000611964 459 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 EIF3FP1-201ENST00000613970 806 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AC100827.5-201ENST00000615883 426 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AL607023.1-201ENST00000620045 248 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AP001784.1-201ENST00000624107 428 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AC025574.1-201ENST00000554784 1653 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 PCAT14-202ENST00000627127 3935 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AC009313.2-201ENST00000417893 1941 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
PTCHD3Q3KNS1 AC083843.2-201ENST00000568248 6253 ntBASIC4.9□□□□□ -1.62
PTCHD3Q3KNS1 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PTCHD3Q3KNS1 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.9□□□□□ -1.62
PTCHD3Q3KNS1 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PTCHD3Q3KNS1 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.9□□□□□ -1.62
PTCHD3Q3KNS1 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.9□□□□□ -1.62
PTCHD3Q3KNS1 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.9□□□□□ -1.62
PTCHD3Q3KNS1 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.9□□□□□ -1.62
PTCHD3Q3KNS1 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.9□□□□□ -1.62
PTCHD3Q3KNS1 RN7SKP104-201ENST00000362605 328 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 RNU6-492P-201ENST00000363035 104 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 SNORA77-201ENST00000408716 125 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AC007738.1-201ENST00000413892 348 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AC013429.2-201ENST00000418798 781 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AC104333.2-201ENST00000422630 192 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 RPP40P1-201ENST00000426762 456 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AC004865.1-201ENST00000442276 1003 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 KNOP1P3-201ENST00000446933 426 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 HIGD1AP8-201ENST00000453927 274 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AC097484.1-201ENST00000471148 389 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 COX6B1P2-201ENST00000489624 230 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AC069304.1-201ENST00000491593 704 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AC092045.1-201ENST00000495716 1231 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AC010350.1-201ENST00000504908 231 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 MTCYBP37-201ENST00000510642 1133 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 MTND5P13-201ENST00000513046 1079 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 RNU6-513P-201ENST00000516104 104 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AC105031.1-201ENST00000518550 476 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 RFPL1S-203ENST00000539579 330 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AP005262.1-201ENST00000582646 997 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AC006272.2-201ENST00000594725 163 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AC018714.1-201ENST00000605028 208 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms