Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 XKRYP3-201ENST00000442113 1116 ntBASIC3.78□□□□□ -1.8
RFC3P40938 AC023512.1-201ENST00000444513 499 ntBASIC3.78□□□□□ -1.8
RFC3P40938 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RFC3P40938 EXTL2P1-201ENST00000446218 416 ntBASIC3.78□□□□□ -1.8
RFC3P40938 AL359073.1-201ENST00000448036 403 ntBASIC3.78□□□□□ -1.8
RFC3P40938 RPL7P31-201ENST00000450192 724 ntBASIC3.78□□□□□ -1.8
RFC3P40938 FABP3P2-201ENST00000453169 399 ntBASIC3.78□□□□□ -1.8
RFC3P40938 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.78□□□□□ -1.8
RFC3P40938 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.78□□□□□ -1.8
RFC3P40938 MTND3P6-201ENST00000485242 339 ntBASIC3.78□□□□□ -1.8
RFC3P40938 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.78□□□□□ -1.8
RFC3P40938 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.78□□□□□ -1.8
RFC3P40938 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
RFC3P40938 AC016550.3-201ENST00000515706 767 ntBASIC3.78□□□□□ -1.8
RFC3P40938 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.78□□□□□ -1.8
RFC3P40938 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.78□□□□□ -1.8
RFC3P40938 AC091515.1-201ENST00000548110 679 ntBASIC3.78□□□□□ -1.8
RFC3P40938 AC074029.2-201ENST00000551045 634 ntBASIC3.78□□□□□ -1.8
RFC3P40938 AC007424.1-203ENST00000554613 687 ntBASIC3.78□□□□□ -1.8
RFC3P40938 AC124068.1-201ENST00000563131 678 ntBASIC3.78□□□□□ -1.8
RFC3P40938 AC034105.4-201ENST00000568304 277 ntBASIC3.78□□□□□ -1.8
RFC3P40938 MIR4512-201ENST00000583257 77 ntBASIC3.78□□□□□ -1.8
RFC3P40938 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.78□□□□□ -1.8
RFC3P40938 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.78□□□□□ -1.8
RFC3P40938 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.78□□□□□ -1.8
RFC3P40938 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RFC3P40938 AC000123.2-201ENST00000623124 461 ntBASIC3.78□□□□□ -1.8
RFC3P40938 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RFC3P40938 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RFC3P40938 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.78□□□□□ -1.8
RFC3P40938 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RFC3P40938 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.78□□□□□ -1.8
RFC3P40938 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
RFC3P40938 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.77□□□□□ -1.81
RFC3P40938 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
RFC3P40938 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.77□□□□□ -1.81
RFC3P40938 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.77□□□□□ -1.81
RFC3P40938 AL122126.1-201ENST00000546905 1318 ntBASIC3.77□□□□□ -1.81
RFC3P40938 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
RFC3P40938 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.77□□□□□ -1.81
RFC3P40938 RNA5SP322-201ENST00000363617 119 ntBASIC3.77□□□□□ -1.81
RFC3P40938 RNA5SP22-201ENST00000365393 109 ntBASIC3.77□□□□□ -1.81
RFC3P40938 MIR421-201ENST00000365696 85 ntBASIC3.77□□□□□ -1.81
RFC3P40938 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.77□□□□□ -1.81
RFC3P40938 ENSAP1-201ENST00000392855 326 ntBASIC3.77□□□□□ -1.81
RFC3P40938 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.77□□□□□ -1.81
RFC3P40938 OR5BE1P-201ENST00000425977 939 ntBASIC3.77□□□□□ -1.81
RFC3P40938 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.77□□□□□ -1.81
RFC3P40938 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.77□□□□□ -1.81
RFC3P40938 RPS4XP4-201ENST00000443195 763 ntBASIC3.77□□□□□ -1.81
RFC3P40938 MTND2P25-201ENST00000449028 610 ntBASIC3.77□□□□□ -1.81
RFC3P40938 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.77□□□□□ -1.81
RFC3P40938 AC010683.1-201ENST00000473673 378 ntBASIC3.77□□□□□ -1.81
RFC3P40938 S100A11P1-201ENST00000477525 312 ntBASIC3.77□□□□□ -1.81
RFC3P40938 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.77□□□□□ -1.81
RFC3P40938 VN1R105P-201ENST00000486595 910 ntBASIC3.77□□□□□ -1.81
RFC3P40938 AC108145.1-201ENST00000503770 153 ntBASIC3.77□□□□□ -1.81
RFC3P40938 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.77□□□□□ -1.81
RFC3P40938 FTH1P21-201ENST00000512179 511 ntBASIC3.77□□□□□ -1.81
RFC3P40938 RNU6-1004P-201ENST00000516584 111 ntBASIC3.77□□□□□ -1.81
RFC3P40938 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.77□□□□□ -1.81
RFC3P40938 RNU1-45P-201ENST00000517191 141 ntBASIC3.77□□□□□ -1.81
RFC3P40938 AC023632.4-201ENST00000517783 191 ntBASIC3.77□□□□□ -1.81
RFC3P40938 IGKV2D-23-201ENST00000518179 286 ntBASIC3.77□□□□□ -1.81
RFC3P40938 IGHV3-32-201ENST00000519182 355 ntBASIC3.77□□□□□ -1.81
RFC3P40938 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.77□□□□□ -1.81
RFC3P40938 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.77□□□□□ -1.81
RFC3P40938 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.77□□□□□ -1.81
RFC3P40938 AC009101.1-201ENST00000568135 242 ntBASIC3.77□□□□□ -1.81
RFC3P40938 MIR4286-201ENST00000580651 93 ntBASIC3.77□□□□□ -1.81
RFC3P40938 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.77□□□□□ -1.81
RFC3P40938 ABI1P1-201ENST00000603375 1120 ntBASIC3.77□□□□□ -1.81
RFC3P40938 AC022387.2-201ENST00000604050 448 ntBASIC3.77□□□□□ -1.81
RFC3P40938 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RFC3P40938 uc_338.32-201ENST00000615087 172 ntBASIC3.77□□□□□ -1.81
RFC3P40938 AC019278.1-201ENST00000623516 479 ntBASIC3.77□□□□□ -1.81
RFC3P40938 OR5BE1P-202ENST00000641168 1176 ntBASIC3.77□□□□□ -1.81
RFC3P40938 AC119674.1-220ENST00000641502 1048 ntBASIC3.77□□□□□ -1.81
RFC3P40938 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.77□□□□□ -1.81
RFC3P40938 AC116667.1-201ENST00000604855 2072 ntBASIC3.77□□□□□ -1.81
RFC3P40938 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RFC3P40938 MTND4P10-201ENST00000446199 1363 ntBASIC3.76□□□□□ -1.81
RFC3P40938 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.76□□□□□ -1.81
RFC3P40938 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RFC3P40938 AL359837.1-201ENST00000381357 287 ntBASIC3.76□□□□□ -1.81
RFC3P40938 RNU6-152P-201ENST00000384037 107 ntBASIC3.76□□□□□ -1.81
RFC3P40938 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
RFC3P40938 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.76□□□□□ -1.81
RFC3P40938 MIR1179-201ENST00000408703 91 ntBASIC3.76□□□□□ -1.81
RFC3P40938 RNA5SP306-201ENST00000411087 107 ntBASIC3.76□□□□□ -1.81
RFC3P40938 HSPE1P12-201ENST00000412576 301 ntBASIC3.76□□□□□ -1.81
RFC3P40938 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.76□□□□□ -1.81
RFC3P40938 RPL36AP36-201ENST00000418616 301 ntBASIC3.76□□□□□ -1.81
RFC3P40938 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.76□□□□□ -1.81
RFC3P40938 AC006011.1-201ENST00000442758 349 ntBASIC3.76□□□□□ -1.81
RFC3P40938 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.76□□□□□ -1.81
RFC3P40938 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.76□□□□□ -1.81
RFC3P40938 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.76□□□□□ -1.81
RFC3P40938 ABCF2P2-201ENST00000450549 296 ntBASIC3.76□□□□□ -1.81
RFC3P40938 RPL5P32-201ENST00000454085 879 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms