Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC104260.2-201ENST00000623551 3497 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL6A2P12110 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL6A2P12110 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.49□□□□□ -1.53
COL6A2P12110 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL6A2P12110 SNORA64.1-201ENST00000362600 132 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL6A2P12110 SNORD56.6-201ENST00000384569 71 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 PPIAP9-201ENST00000403866 498 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 AC245052.5-201ENST00000416320 649 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.49□□□□□ -1.53
COL6A2P12110 USP9YP13-201ENST00000417797 480 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 AC007394.1-201ENST00000421941 531 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.49□□□□□ -1.53
COL6A2P12110 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.49□□□□□ -1.53
COL6A2P12110 AC000111.3-201ENST00000433478 193 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 AMYP1-201ENST00000440059 1023 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.49□□□□□ -1.53
COL6A2P12110 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.49□□□□□ -1.53
COL6A2P12110 AL022238.1-201ENST00000442557 355 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 UBFD1P1-201ENST00000473259 814 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 RPL21P6-201ENST00000479171 504 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 AC013828.1-201ENST00000481845 158 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.49□□□□□ -1.53
COL6A2P12110 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.49□□□□□ -1.53
COL6A2P12110 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.49□□□□□ -1.53
COL6A2P12110 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL6A2P12110 AC006499.2-201ENST00000513470 337 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.49□□□□□ -1.53
COL6A2P12110 RNU6-513P-201ENST00000516104 104 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 RNU6-718P-201ENST00000516166 105 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 Y_RNA.667-201ENST00000516212 107 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 RNA5SP438-201ENST00000516561 112 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.49□□□□□ -1.53
COL6A2P12110 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.49□□□□□ -1.53
COL6A2P12110 AC068587.4-201ENST00000533893 186 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.49□□□□□ -1.53
COL6A2P12110 AC079905.1-201ENST00000549280 475 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 UBE2FP2-201ENST00000566646 462 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.49□□□□□ -1.53
COL6A2P12110 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL6A2P12110 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.49□□□□□ -1.53
COL6A2P12110 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.49□□□□□ -1.53
COL6A2P12110 AP000860.1-201ENST00000605250 559 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 AC024884.1-201ENST00000620583 399 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.49□□□□□ -1.53
COL6A2P12110 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.49□□□□□ -1.53
COL6A2P12110 AC005609.4-201ENST00000625071 447 ntBASIC5.49□□□□□ -1.53
COL6A2P12110 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.49□□□□□ -1.53
COL6A2P12110 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL6A2P12110 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL6A2P12110 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL6A2P12110 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL6A2P12110 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
COL6A2P12110 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
COL6A2P12110 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.48□□□□□ -1.53
COL6A2P12110 RBPJP2-201ENST00000618187 1444 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.48□□□□□ -1.53
COL6A2P12110 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
COL6A2P12110 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL6A2P12110 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL6A2P12110 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
COL6A2P12110 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
COL6A2P12110 RNA5SP477-201ENST00000362639 119 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 RNA5SP433-201ENST00000364491 114 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
COL6A2P12110 RNA5SP241-201ENST00000391326 114 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
COL6A2P12110 RPS3AP23-201ENST00000401762 784 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 Y_RNA.598-201ENST00000410480 95 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 AC048351.1-201ENST00000420064 602 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.48□□□□□ -1.53
COL6A2P12110 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.48□□□□□ -1.53
COL6A2P12110 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.48□□□□□ -1.53
COL6A2P12110 RPL7AP49-201ENST00000429522 581 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 AC079807.1-201ENST00000429993 481 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 AL591438.1-201ENST00000433508 581 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 RPS26P40-201ENST00000435209 294 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.48□□□□□ -1.53
COL6A2P12110 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.48□□□□□ -1.53
COL6A2P12110 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.48□□□□□ -1.53
COL6A2P12110 AC144530.1-201ENST00000452862 555 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.48□□□□□ -1.53
COL6A2P12110 snoU109.1-201ENST00000459339 135 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 AC097493.1-201ENST00000463958 372 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 AC023424.1-201ENST00000496058 459 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.48□□□□□ -1.53
COL6A2P12110 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.48□□□□□ -1.53
COL6A2P12110 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.48□□□□□ -1.53
COL6A2P12110 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.48□□□□□ -1.53
COL6A2P12110 AL671862.1-201ENST00000515851 349 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 RNU6-314P-201ENST00000516574 104 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.48□□□□□ -1.53
COL6A2P12110 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.48□□□□□ -1.53
COL6A2P12110 AC018552.1-201ENST00000562099 811 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.48□□□□□ -1.53
COL6A2P12110 AC012417.1-201ENST00000582307 1039 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.48□□□□□ -1.53
COL6A2P12110 AC017100.2-201ENST00000584628 355 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 264.1 ms