Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC008638.3-201ENST00000603341 463 ntBASIC3.18□□□□□ -1.9
CD28P10747 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.18□□□□□ -1.9
CD28P10747 AC015813.4-201ENST00000610469 179 ntBASIC3.18□□□□□ -1.9
CD28P10747 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.18□□□□□ -1.9
CD28P10747 AC090246.1-201ENST00000616499 426 ntBASIC3.18□□□□□ -1.9
CD28P10747 uc_338.9-201ENST00000617424 182 ntBASIC3.18□□□□□ -1.9
CD28P10747 AC074276.2-201ENST00000619891 348 ntBASIC3.18□□□□□ -1.9
CD28P10747 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CD28P10747 LINC00216-201ENST00000623548 1126 ntBASIC3.18□□□□□ -1.9
CD28P10747 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.18□□□□□ -1.9
CD28P10747 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.18□□□□□ -1.9
CD28P10747 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CD28P10747 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.18□□□□□ -1.9
CD28P10747 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.18□□□□□ -1.9
CD28P10747 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
CD28P10747 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.18□□□□□ -1.9
CD28P10747 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CD28P10747 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
CD28P10747 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CD28P10747 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CD28P10747 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CD28P10747 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CD28P10747 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CD28P10747 AL118496.1-201ENST00000440201 1812 ntBASIC3.17□□□□□ -1.9
CD28P10747 AC012020.1-201ENST00000624541 1728 ntBASIC3.17□□□□□ -1.9
CD28P10747 RNU1-15P-201ENST00000353977 144 ntBASIC3.17□□□□□ -1.9
CD28P10747 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CD28P10747 AL590704.1-201ENST00000402856 794 ntBASIC3.17□□□□□ -1.9
CD28P10747 TCEA1P4-201ENST00000415066 844 ntBASIC3.17□□□□□ -1.9
CD28P10747 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.17□□□□□ -1.9
CD28P10747 TBCAP1-201ENST00000436520 327 ntBASIC3.17□□□□□ -1.9
CD28P10747 RRM2P4-201ENST00000441721 562 ntBASIC3.17□□□□□ -1.9
CD28P10747 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.17□□□□□ -1.9
CD28P10747 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.17□□□□□ -1.9
CD28P10747 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.17□□□□□ -1.9
CD28P10747 AC010469.1-201ENST00000463864 576 ntBASIC3.17□□□□□ -1.9
CD28P10747 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.17□□□□□ -1.9
CD28P10747 RPL29P14-201ENST00000495837 428 ntBASIC3.17□□□□□ -1.9
CD28P10747 HMGB1P3-201ENST00000502802 616 ntBASIC3.17□□□□□ -1.9
CD28P10747 BNIP3P41-201ENST00000503774 571 ntBASIC3.17□□□□□ -1.9
CD28P10747 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.17□□□□□ -1.9
CD28P10747 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.17□□□□□ -1.9
CD28P10747 KRT19P6-201ENST00000510983 209 ntBASIC3.17□□□□□ -1.9
CD28P10747 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.17□□□□□ -1.9
CD28P10747 SNORD116-26-201ENST00000516006 96 ntBASIC3.17□□□□□ -1.9
CD28P10747 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.17□□□□□ -1.9
CD28P10747 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.17□□□□□ -1.9
CD28P10747 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.17□□□□□ -1.9
CD28P10747 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.17□□□□□ -1.9
CD28P10747 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.17□□□□□ -1.9
CD28P10747 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.17□□□□□ -1.9
CD28P10747 AC067805.1-201ENST00000559344 470 ntBASIC3.17□□□□□ -1.9
CD28P10747 AC084757.1-201ENST00000559987 490 ntBASIC3.17□□□□□ -1.9
CD28P10747 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.17□□□□□ -1.9
CD28P10747 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.17□□□□□ -1.9
CD28P10747 RPL23AP87-202ENST00000573039 466 ntBASIC3.17□□□□□ -1.9
CD28P10747 AC025627.2-201ENST00000576220 160 ntBASIC3.17□□□□□ -1.9
CD28P10747 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.17□□□□□ -1.9
CD28P10747 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.17□□□□□ -1.9
CD28P10747 AC110743.1-201ENST00000584870 478 ntBASIC3.17□□□□□ -1.9
CD28P10747 MIR5684-201ENST00000585074 65 ntBASIC3.17□□□□□ -1.9
CD28P10747 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.17□□□□□ -1.9
CD28P10747 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CD28P10747 AL133247.2-201ENST00000603236 482 ntBASIC3.17□□□□□ -1.9
CD28P10747 AL049844.2-201ENST00000604280 628 ntBASIC3.17□□□□□ -1.9
CD28P10747 AL451044.1-201ENST00000604867 238 ntBASIC3.17□□□□□ -1.9
CD28P10747 AL592436.1-201ENST00000605135 558 ntBASIC3.17□□□□□ -1.9
CD28P10747 AL451086.1-201ENST00000605596 223 ntBASIC3.17□□□□□ -1.9
CD28P10747 AC242628.1-201ENST00000606810 391 ntBASIC3.17□□□□□ -1.9
CD28P10747 MIR6868-201ENST00000611215 58 ntBASIC3.17□□□□□ -1.9
CD28P10747 AC067852.7-201ENST00000623270 535 ntBASIC3.17□□□□□ -1.9
CD28P10747 AC112200.1-201ENST00000625015 234 ntBASIC3.17□□□□□ -1.9
CD28P10747 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.17□□□□□ -1.9
CD28P10747 OR8B1P-202ENST00000641132 1178 ntBASIC3.17□□□□□ -1.9
CD28P10747 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.17□□□□□ -1.9
CD28P10747 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CD28P10747 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CD28P10747 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
CD28P10747 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.16□□□□□ -1.9
CD28P10747 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CD28P10747 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CD28P10747 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.16□□□□□ -1.9
CD28P10747 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CD28P10747 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.16□□□□□ -1.9
CD28P10747 AC096656.1-201ENST00000623826 1364 ntBASIC3.16□□□□□ -1.9
CD28P10747 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CD28P10747 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CD28P10747 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.16□□□□□ -1.9
CD28P10747 SNORA60-201ENST00000362396 134 ntBASIC3.16□□□□□ -1.9
CD28P10747 SNORD35B-201ENST00000363660 87 ntBASIC3.16□□□□□ -1.9
CD28P10747 RHOT1P2-201ENST00000366423 333 ntBASIC3.16□□□□□ -1.9
CD28P10747 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CD28P10747 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CD28P10747 MIR92A2-201ENST00000385299 75 ntBASIC3.16□□□□□ -1.9
CD28P10747 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CD28P10747 AC013404.1-201ENST00000413068 249 ntBASIC3.16□□□□□ -1.9
CD28P10747 RANP4-201ENST00000413361 655 ntBASIC3.16□□□□□ -1.9
CD28P10747 TRGV6-201ENST00000417928 299 ntBASIC3.16□□□□□ -1.9
CD28P10747 AC004552.1-201ENST00000419089 348 ntBASIC3.16□□□□□ -1.9
CD28P10747 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms