Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RNA5SP143-201ENST00000516936 115 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC6P09630 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC6P09630 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC6P09630 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC6P09630 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.89□□□□□ -1.63
HOXC6P09630 AC009097.3-201ENST00000563557 1018 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC6P09630 AC145350.1-201ENST00000567426 208 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC6P09630 AC124283.4-201ENST00000581815 456 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.89□□□□□ -1.63
HOXC6P09630 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.89□□□□□ -1.63
HOXC6P09630 PCNAP1-202ENST00000595299 752 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC6P09630 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC6P09630 AC093673.2-201ENST00000609674 331 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 VN1R9P-201ENST00000614184 867 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 AC231759.1-201ENST00000616455 597 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 AC021755.4-201ENST00000616620 456 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 AP003399.1-201ENST00000637534 361 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 AL672167.1-203ENST00000641299 2975 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HOXC6P09630 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC6P09630 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC6P09630 RLIMP1-201ENST00000339626 1680 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC6P09630 MTND5P31-201ENST00000419366 1374 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 MTND4P8-201ENST00000514997 1362 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC6P09630 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HOXC6P09630 AC097461.1-201ENST00000568928 2821 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC6P09630 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HOXC6P09630 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC6P09630 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC6P09630 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC6P09630 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXC6P09630 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC6P09630 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC6P09630 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HOXC6P09630 RNU6-1251P-201ENST00000364502 107 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 SNORA62.3-201ENST00000365110 153 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HOXC6P09630 RPL21P65-201ENST00000406094 466 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC6P09630 LIPT1P1-201ENST00000415870 1186 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC6P09630 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC6P09630 AC115285.1-201ENST00000424879 736 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 AL160175.1-201ENST00000428124 247 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXC6P09630 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC6P09630 USP9YP24-201ENST00000434374 697 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 AC007389.2-201ENST00000434630 306 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 USP9YP17-201ENST00000444617 696 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 Z73417.1-201ENST00000447373 778 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 AL358232.1-201ENST00000448030 501 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 AC092155.2-201ENST00000454675 477 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 RPL23AP81-201ENST00000455252 467 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 RPL21P47-201ENST00000483696 477 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 AP000563.1-201ENST00000490865 758 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 RPS4XP18-201ENST00000495480 763 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC6P09630 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXC6P09630 AC093752.1-206ENST00000511823 336 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 NPM1P41-201ENST00000512920 831 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 RNU1-45P-201ENST00000517191 141 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 IFITM8P-201ENST00000522529 394 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC6P09630 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC6P09630 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXC6P09630 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC6P09630 AL121839.1-201ENST00000556233 1185 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC6P09630 AC146944.4-201ENST00000602697 718 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 AC073387.2-201ENST00000604797 784 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 AL592494.3-201ENST00000609485 464 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
HOXC6P09630 AC234782.5-201ENST00000617723 324 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 AP002967.1-201ENST00000624203 539 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXC6P09630 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC6P09630 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC6P09630 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
HOXC6P09630 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC6P09630 AL161912.2-201ENST00000565707 3007 ntBASIC4.88□□□□□ -1.63
HOXC6P09630 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC6P09630 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC6P09630 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXC6P09630 MTND5P23-201ENST00000430812 1655 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC6P09630 RNU1-63P-201ENST00000383902 164 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 MIR513B-201ENST00000385136 84 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC6P09630 RPL5P19-201ENST00000404228 893 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC6P09630 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC6P09630 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXC6P09630 AC010099.3-201ENST00000423896 409 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms