Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC023050.1-201ENST00000498198 304 ntBASIC4.86□□□□□ -1.63
MMP3P08254 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.86□□□□□ -1.63
MMP3P08254 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MMP3P08254 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.86□□□□□ -1.63
MMP3P08254 AC008837.1-201ENST00000511513 412 ntBASIC4.86□□□□□ -1.63
MMP3P08254 RNA5SP519-201ENST00000516480 119 ntBASIC4.86□□□□□ -1.63
MMP3P08254 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.86□□□□□ -1.63
MMP3P08254 AC104417.1-201ENST00000523974 751 ntBASIC4.86□□□□□ -1.63
MMP3P08254 MED28P5-201ENST00000528254 438 ntBASIC4.86□□□□□ -1.63
MMP3P08254 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.86□□□□□ -1.63
MMP3P08254 AC025260.1-201ENST00000548858 430 ntBASIC4.86□□□□□ -1.63
MMP3P08254 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.86□□□□□ -1.63
MMP3P08254 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.86□□□□□ -1.63
MMP3P08254 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.86□□□□□ -1.63
MMP3P08254 RN7SL600P-201ENST00000581811 299 ntBASIC4.86□□□□□ -1.63
MMP3P08254 AC025811.1-201ENST00000604312 472 ntBASIC4.86□□□□□ -1.63
MMP3P08254 AC090525.3-201ENST00000605601 189 ntBASIC4.86□□□□□ -1.63
MMP3P08254 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.86□□□□□ -1.63
MMP3P08254 BNIP3P41-202ENST00000616656 861 ntBASIC4.86□□□□□ -1.63
MMP3P08254 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.86□□□□□ -1.63
MMP3P08254 AL445363.3-201ENST00000623080 671 ntBASIC4.86□□□□□ -1.63
MMP3P08254 AC068057.2-201ENST00000624047 895 ntBASIC4.86□□□□□ -1.63
MMP3P08254 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.86□□□□□ -1.63
MMP3P08254 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MMP3P08254 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
MMP3P08254 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.86□□□□□ -1.63
MMP3P08254 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MMP3P08254 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
MMP3P08254 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
MMP3P08254 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.86□□□□□ -1.63
MMP3P08254 AL672167.1-204ENST00000641875 3017 ntBASIC4.86□□□□□ -1.63
MMP3P08254 AC104260.2-201ENST00000623551 3497 ntBASIC4.85□□□□□ -1.63
MMP3P08254 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
MMP3P08254 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.85□□□□□ -1.63
MMP3P08254 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
MMP3P08254 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MMP3P08254 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.85□□□□□ -1.63
MMP3P08254 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.85□□□□□ -1.63
MMP3P08254 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
MMP3P08254 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
MMP3P08254 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
MMP3P08254 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
MMP3P08254 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
MMP3P08254 MIR372-201ENST00000362225 67 ntBASIC4.85□□□□□ -1.63
MMP3P08254 RNA5SP151-201ENST00000365632 117 ntBASIC4.85□□□□□ -1.63
MMP3P08254 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.85□□□□□ -1.63
MMP3P08254 RNU6-185P-201ENST00000384421 107 ntBASIC4.85□□□□□ -1.63
MMP3P08254 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MMP3P08254 VDAC2P1-201ENST00000399358 958 ntBASIC4.85□□□□□ -1.63
MMP3P08254 PPIAP31-201ENST00000405422 495 ntBASIC4.85□□□□□ -1.63
MMP3P08254 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
MMP3P08254 RN7SKP222-201ENST00000410651 315 ntBASIC4.85□□□□□ -1.63
MMP3P08254 AC105402.1-201ENST00000413336 545 ntBASIC4.85□□□□□ -1.63
MMP3P08254 RPL6P29-201ENST00000414863 865 ntBASIC4.85□□□□□ -1.63
MMP3P08254 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
MMP3P08254 AL157831.1-201ENST00000426134 473 ntBASIC4.85□□□□□ -1.63
MMP3P08254 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.85□□□□□ -1.63
MMP3P08254 AC022022.1-201ENST00000430304 178 ntBASIC4.85□□□□□ -1.63
MMP3P08254 HMGB3P10-201ENST00000434734 572 ntBASIC4.85□□□□□ -1.63
MMP3P08254 PTGES3P1-201ENST00000439531 483 ntBASIC4.85□□□□□ -1.63
MMP3P08254 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.85□□□□□ -1.63
MMP3P08254 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.85□□□□□ -1.63
MMP3P08254 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MMP3P08254 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MMP3P08254 NAP1L1P3-201ENST00000462291 880 ntBASIC4.85□□□□□ -1.63
MMP3P08254 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
MMP3P08254 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
MMP3P08254 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.85□□□□□ -1.63
MMP3P08254 RNA5SP446-201ENST00000515955 82 ntBASIC4.85□□□□□ -1.63
MMP3P08254 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.85□□□□□ -1.63
MMP3P08254 SETP1-201ENST00000556014 845 ntBASIC4.85□□□□□ -1.63
MMP3P08254 AC034105.4-201ENST00000568304 277 ntBASIC4.85□□□□□ -1.63
MMP3P08254 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.85□□□□□ -1.63
MMP3P08254 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.85□□□□□ -1.63
MMP3P08254 AC008751.2-201ENST00000597885 980 ntBASIC4.85□□□□□ -1.63
MMP3P08254 AC008966.2-201ENST00000606157 453 ntBASIC4.85□□□□□ -1.63
MMP3P08254 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
MMP3P08254 FRG1HP-204ENST00000617940 757 ntBASIC4.85□□□□□ -1.63
MMP3P08254 AC013470.4-201ENST00000619978 986 ntBASIC4.85□□□□□ -1.63
MMP3P08254 AC123767.1-202ENST00000620407 817 ntBASIC4.85□□□□□ -1.63
MMP3P08254 AP001005.3-201ENST00000622049 129 ntBASIC4.85□□□□□ -1.63
MMP3P08254 AC091905.2-201ENST00000623143 306 ntBASIC4.85□□□□□ -1.63
MMP3P08254 AC034229.5-201ENST00000624258 185 ntBASIC4.85□□□□□ -1.63
MMP3P08254 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
MMP3P08254 AL122126.1-201ENST00000546905 1318 ntBASIC4.85□□□□□ -1.63
MMP3P08254 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
MMP3P08254 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
MMP3P08254 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.85□□□□□ -1.63
MMP3P08254 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
MMP3P08254 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
MMP3P08254 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.84□□□□□ -1.63
MMP3P08254 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
MMP3P08254 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
MMP3P08254 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.84□□□□□ -1.63
MMP3P08254 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.84□□□□□ -1.63
MMP3P08254 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
MMP3P08254 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
MMP3P08254 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
MMP3P08254 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
MMP3P08254 RNU1-14P-201ENST00000362759 152 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms