Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DQB2P05538 NOTCH2P1-201ENST00000443481 624 ntBASIC3.72□□□□□ -1.81
HLA-DQB2P05538 RPL21P133-201ENST00000443666 476 ntBASIC3.72□□□□□ -1.81
HLA-DQB2P05538 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DQB2P05538 AC006511.1-201ENST00000470614 315 ntBASIC3.72□□□□□ -1.81
HLA-DQB2P05538 AC020898.1-201ENST00000474167 787 ntBASIC3.72□□□□□ -1.81
HLA-DQB2P05538 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DQB2P05538 AL121766.1-201ENST00000547436 487 ntBASIC3.72□□□□□ -1.81
HLA-DQB2P05538 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.72□□□□□ -1.81
HLA-DQB2P05538 SNORD39.2-201ENST00000579995 76 ntBASIC3.72□□□□□ -1.81
HLA-DQB2P05538 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DQB2P05538 VN1R81P-201ENST00000602085 372 ntBASIC3.72□□□□□ -1.81
HLA-DQB2P05538 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DQB2P05538 AC023813.4-201ENST00000607580 580 ntBASIC3.72□□□□□ -1.81
HLA-DQB2P05538 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DQB2P05538 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DQB2P05538 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DQB2P05538 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.72□□□□□ -1.81
HLA-DQB2P05538 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
HLA-DQB2P05538 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DQB2P05538 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.71□□□□□ -1.81
HLA-DQB2P05538 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DQB2P05538 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DQB2P05538 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DQB2P05538 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
HLA-DQB2P05538 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
HLA-DQB2P05538 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DQB2P05538 MIR365B-201ENST00000362317 111 ntBASIC3.71□□□□□ -1.82
HLA-DQB2P05538 RNA5SP124-201ENST00000362739 110 ntBASIC3.71□□□□□ -1.82
HLA-DQB2P05538 RNU6-1331P-201ENST00000363658 106 ntBASIC3.71□□□□□ -1.82
HLA-DQB2P05538 HSPD1P16-201ENST00000402302 394 ntBASIC3.71□□□□□ -1.82
HLA-DQB2P05538 AL590704.1-201ENST00000402856 794 ntBASIC3.71□□□□□ -1.82
HLA-DQB2P05538 NCSTNP1-201ENST00000406229 144 ntBASIC3.71□□□□□ -1.82
HLA-DQB2P05538 RN7SKP159-201ENST00000410657 292 ntBASIC3.71□□□□□ -1.82
HLA-DQB2P05538 RAC1P3-201ENST00000416129 580 ntBASIC3.71□□□□□ -1.82
HLA-DQB2P05538 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DQB2P05538 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DQB2P05538 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DQB2P05538 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DQB2P05538 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DQB2P05538 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DQB2P05538 AL162388.1-201ENST00000450912 352 ntBASIC3.71□□□□□ -1.82
HLA-DQB2P05538 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DQB2P05538 MTND4LP31-201ENST00000514859 294 ntBASIC3.71□□□□□ -1.82
HLA-DQB2P05538 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DQB2P05538 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DQB2P05538 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.71□□□□□ -1.82
HLA-DQB2P05538 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DQB2P05538 AL713998.2-201ENST00000604538 1198 ntBASIC3.71□□□□□ -1.82
HLA-DQB2P05538 AL121772.2-201ENST00000614331 297 ntBASIC3.71□□□□□ -1.82
HLA-DQB2P05538 AC119674.1-207ENST00000641355 633 ntBASIC3.71□□□□□ -1.82
HLA-DQB2P05538 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DQB2P05538 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DQB2P05538 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DQB2P05538 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
HLA-DQB2P05538 AC073073.2-201ENST00000609827 2578 ntBASIC3.7□□□□□ -1.82
HLA-DQB2P05538 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 RNU6-984P-201ENST00000363236 109 ntBASIC3.7□□□□□ -1.82
HLA-DQB2P05538 RNA5SP51-201ENST00000364750 119 ntBASIC3.7□□□□□ -1.82
HLA-DQB2P05538 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 AC009302.1-201ENST00000417147 390 ntBASIC3.7□□□□□ -1.82
HLA-DQB2P05538 RPS26P47-201ENST00000427219 348 ntBASIC3.7□□□□□ -1.82
HLA-DQB2P05538 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 AL133244.1-201ENST00000456007 258 ntBASIC3.7□□□□□ -1.82
HLA-DQB2P05538 NPM1P17-201ENST00000479221 602 ntBASIC3.7□□□□□ -1.82
HLA-DQB2P05538 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 GTF2IP22-201ENST00000554443 182 ntBASIC3.7□□□□□ -1.82
HLA-DQB2P05538 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 AC027281.1-201ENST00000574178 758 ntBASIC3.7□□□□□ -1.82
HLA-DQB2P05538 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 AL139286.1-201ENST00000604465 483 ntBASIC3.7□□□□□ -1.82
HLA-DQB2P05538 AL135786.2-201ENST00000608422 615 ntBASIC3.7□□□□□ -1.82
HLA-DQB2P05538 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 AC007656.2-201ENST00000624902 4547 ntBASIC3.7□□□□□ -1.82
HLA-DQB2P05538 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DQB2P05538 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DQB2P05538 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DQB2P05538 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms