Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC005019.1-201ENST00000436455 431 ntBASIC3.39□□□□□ -1.87
SPTA1P02549 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC3.39□□□□□ -1.87
SPTA1P02549 AL591473.1-201ENST00000464297 313 ntBASIC3.39□□□□□ -1.87
SPTA1P02549 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
SPTA1P02549 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.39□□□□□ -1.87
SPTA1P02549 YWHAEP4-201ENST00000505390 198 ntBASIC3.39□□□□□ -1.87
SPTA1P02549 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.39□□□□□ -1.87
SPTA1P02549 SNORA70.17-201ENST00000516449 133 ntBASIC3.39□□□□□ -1.87
SPTA1P02549 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.39□□□□□ -1.87
SPTA1P02549 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC3.39□□□□□ -1.87
SPTA1P02549 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SPTA1P02549 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.39□□□□□ -1.87
SPTA1P02549 AC009303.3-201ENST00000591103 736 ntBASIC3.39□□□□□ -1.87
SPTA1P02549 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.39□□□□□ -1.87
SPTA1P02549 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SPTA1P02549 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SPTA1P02549 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SPTA1P02549 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SPTA1P02549 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SPTA1P02549 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SPTA1P02549 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC3.39□□□□□ -1.87
SPTA1P02549 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.39□□□□□ -1.87
SPTA1P02549 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SPTA1P02549 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SPTA1P02549 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC3.39□□□□□ -1.87
SPTA1P02549 Y_RNA.238-201ENST00000364441 102 ntBASIC3.39□□□□□ -1.87
SPTA1P02549 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.39□□□□□ -1.87
SPTA1P02549 AC096644.3-201ENST00000416788 338 ntBASIC3.39□□□□□ -1.87
SPTA1P02549 AL157385.1-201ENST00000446973 268 ntBASIC3.39□□□□□ -1.87
SPTA1P02549 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.39□□□□□ -1.87
SPTA1P02549 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.39□□□□□ -1.87
SPTA1P02549 ATP5F1P5-201ENST00000526403 760 ntBASIC3.39□□□□□ -1.87
SPTA1P02549 PHBP17-201ENST00000528576 541 ntBASIC3.39□□□□□ -1.87
SPTA1P02549 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SPTA1P02549 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SPTA1P02549 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SPTA1P02549 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.38□□□□□ -1.87
SPTA1P02549 MIR133A2-201ENST00000347538 102 ntBASIC3.38□□□□□ -1.87
SPTA1P02549 TPTE2P3-201ENST00000441562 1189 ntBASIC3.38□□□□□ -1.87
SPTA1P02549 VN1R48P-201ENST00000448149 1036 ntBASIC3.38□□□□□ -1.87
SPTA1P02549 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.38□□□□□ -1.87
SPTA1P02549 AP003392.5-201ENST00000607857 415 ntBASIC3.38□□□□□ -1.87
SPTA1P02549 AC093732.2-201ENST00000607950 274 ntBASIC3.38□□□□□ -1.87
SPTA1P02549 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC3.38□□□□□ -1.87
SPTA1P02549 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SPTA1P02549 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC3.38□□□□□ -1.87
SPTA1P02549 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
SPTA1P02549 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.38□□□□□ -1.87
SPTA1P02549 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SPTA1P02549 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SPTA1P02549 AL365440.1-201ENST00000436135 2167 ntBASIC3.38□□□□□ -1.87
SPTA1P02549 PHACTR2P1-201ENST00000605639 1414 ntBASIC3.38□□□□□ -1.87
SPTA1P02549 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SPTA1P02549 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SPTA1P02549 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SPTA1P02549 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.38□□□□□ -1.87
SPTA1P02549 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.38□□□□□ -1.87
SPTA1P02549 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SPTA1P02549 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
SPTA1P02549 SNORA80A-201ENST00000363922 136 ntBASIC3.38□□□□□ -1.87
SPTA1P02549 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.38□□□□□ -1.87
SPTA1P02549 AP001992.1-205ENST00000462248 379 ntBASIC3.38□□□□□ -1.87
SPTA1P02549 AC108751.2-201ENST00000469993 231 ntBASIC3.38□□□□□ -1.87
SPTA1P02549 RNU2-27P-201ENST00000516185 142 ntBASIC3.38□□□□□ -1.87
SPTA1P02549 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SPTA1P02549 AC011611.1-201ENST00000552179 197 ntBASIC3.38□□□□□ -1.87
SPTA1P02549 AC091544.4-201ENST00000555268 342 ntBASIC3.38□□□□□ -1.87
SPTA1P02549 MIR7702-201ENST00000621931 59 ntBASIC3.38□□□□□ -1.87
SPTA1P02549 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC3.38□□□□□ -1.87
SPTA1P02549 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SPTA1P02549 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SPTA1P02549 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SPTA1P02549 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SPTA1P02549 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SPTA1P02549 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.37□□□□□ -1.87
SPTA1P02549 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
SPTA1P02549 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.37□□□□□ -1.87
SPTA1P02549 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SPTA1P02549 AL079342.1-201ENST00000401460 267 ntBASIC3.37□□□□□ -1.87
SPTA1P02549 AL139413.1-201ENST00000421309 217 ntBASIC3.37□□□□□ -1.87
SPTA1P02549 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.37□□□□□ -1.87
SPTA1P02549 AL136097.1-201ENST00000456945 913 ntBASIC3.37□□□□□ -1.87
SPTA1P02549 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.37□□□□□ -1.87
SPTA1P02549 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.37□□□□□ -1.87
SPTA1P02549 AL451007.1-201ENST00000595491 289 ntBASIC3.37□□□□□ -1.87
SPTA1P02549 AC124312.6-202ENST00000623624 418 ntBASIC3.37□□□□□ -1.87
SPTA1P02549 AC090337.1-201ENST00000579651 2074 ntBASIC3.37□□□□□ -1.87
SPTA1P02549 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SPTA1P02549 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.37□□□□□ -1.87
SPTA1P02549 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SPTA1P02549 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.37□□□□□ -1.87
SPTA1P02549 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SPTA1P02549 RNA5SP187-201ENST00000384400 119 ntBASIC3.36□□□□□ -1.87
SPTA1P02549 MIR199A2-201ENST00000385289 110 ntBASIC3.36□□□□□ -1.87
SPTA1P02549 NACAP7-201ENST00000407371 609 ntBASIC3.36□□□□□ -1.87
SPTA1P02549 RNA5SP80-201ENST00000410475 111 ntBASIC3.36□□□□□ -1.87
SPTA1P02549 OR1AA1P-201ENST00000419597 916 ntBASIC3.36□□□□□ -1.87
SPTA1P02549 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.36□□□□□ -1.87
SPTA1P02549 RPS26P2-201ENST00000440331 348 ntBASIC3.36□□□□□ -1.87
SPTA1P02549 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms