Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.42□□□□□ -1.7
COL1A1P02452 AL365440.1-201ENST00000436135 2167 ntBASIC4.42□□□□□ -1.7
COL1A1P02452 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL1A1P02452 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.42□□□□□ -1.7
COL1A1P02452 RNA5SP50-201ENST00000363731 107 ntBASIC4.42□□□□□ -1.7
COL1A1P02452 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.42□□□□□ -1.7
COL1A1P02452 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL1A1P02452 AC097713.2-201ENST00000430199 356 ntBASIC4.42□□□□□ -1.7
COL1A1P02452 AC005019.1-201ENST00000436455 431 ntBASIC4.42□□□□□ -1.7
COL1A1P02452 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.42□□□□□ -1.7
COL1A1P02452 YWHAQP9-201ENST00000445891 512 ntBASIC4.42□□□□□ -1.7
COL1A1P02452 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.42□□□□□ -1.7
COL1A1P02452 RBMY2UP-201ENST00000453474 324 ntBASIC4.42□□□□□ -1.7
COL1A1P02452 AC098799.1-201ENST00000504752 800 ntBASIC4.42□□□□□ -1.7
COL1A1P02452 RNU1-103P-201ENST00000516502 125 ntBASIC4.42□□□□□ -1.7
COL1A1P02452 MRPS35P3-201ENST00000603189 709 ntBASIC4.42□□□□□ -1.7
COL1A1P02452 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
COL1A1P02452 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL1A1P02452 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
COL1A1P02452 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.42□□□□□ -1.7
COL1A1P02452 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL1A1P02452 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.41□□□□□ -1.7
COL1A1P02452 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.41□□□□□ -1.7
COL1A1P02452 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL1A1P02452 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
COL1A1P02452 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL1A1P02452 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.41□□□□□ -1.7
COL1A1P02452 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
COL1A1P02452 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.41□□□□□ -1.7
COL1A1P02452 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL1A1P02452 HMGB3P20-201ENST00000417997 600 ntBASIC4.41□□□□□ -1.7
COL1A1P02452 KPNA2P2-201ENST00000419546 1489 ntBASIC4.41□□□□□ -1.7
COL1A1P02452 AC245054.1-201ENST00000420944 258 ntBASIC4.41□□□□□ -1.7
COL1A1P02452 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.41□□□□□ -1.7
COL1A1P02452 AC073063.1-201ENST00000434352 607 ntBASIC4.41□□□□□ -1.7
COL1A1P02452 AL591503.2-201ENST00000442314 1005 ntBASIC4.41□□□□□ -1.7
COL1A1P02452 RPL23AP94-201ENST00000512518 302 ntBASIC4.41□□□□□ -1.7
COL1A1P02452 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL1A1P02452 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.41□□□□□ -1.7
COL1A1P02452 AC103843.2-201ENST00000530523 682 ntBASIC4.41□□□□□ -1.7
COL1A1P02452 AC024224.1-201ENST00000538284 609 ntBASIC4.41□□□□□ -1.7
COL1A1P02452 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.41□□□□□ -1.7
COL1A1P02452 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.41□□□□□ -1.7
COL1A1P02452 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.41□□□□□ -1.7
COL1A1P02452 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.41□□□□□ -1.7
COL1A1P02452 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.41□□□□□ -1.7
COL1A1P02452 AC115621.1-201ENST00000604653 858 ntBASIC4.41□□□□□ -1.7
COL1A1P02452 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL1A1P02452 AC233309.1-201ENST00000619522 751 ntBASIC4.41□□□□□ -1.7
COL1A1P02452 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.41□□□□□ -1.7
COL1A1P02452 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.41□□□□□ -1.7
COL1A1P02452 SCN1A-220ENST00000641603 12506 ntBASIC4.41□□□□□ -1.7
COL1A1P02452 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL1A1P02452 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL1A1P02452 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL1A1P02452 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL1A1P02452 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.4□□□□□ -1.7
COL1A1P02452 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
COL1A1P02452 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
COL1A1P02452 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
COL1A1P02452 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.4□□□□□ -1.71
COL1A1P02452 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL1A1P02452 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
COL1A1P02452 MIR448-201ENST00000362131 111 ntBASIC4.4□□□□□ -1.71
COL1A1P02452 HLFP1-201ENST00000402375 499 ntBASIC4.4□□□□□ -1.71
COL1A1P02452 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.4□□□□□ -1.71
COL1A1P02452 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.4□□□□□ -1.71
COL1A1P02452 ATP5HP2-201ENST00000433885 485 ntBASIC4.4□□□□□ -1.71
COL1A1P02452 BX510359.1-201ENST00000456973 237 ntBASIC4.4□□□□□ -1.71
COL1A1P02452 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.4□□□□□ -1.71
COL1A1P02452 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.4□□□□□ -1.71
COL1A1P02452 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.4□□□□□ -1.71
COL1A1P02452 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.4□□□□□ -1.71
COL1A1P02452 AC010591.1-201ENST00000603941 649 ntBASIC4.4□□□□□ -1.71
COL1A1P02452 AC133552.5-201ENST00000604266 540 ntBASIC4.4□□□□□ -1.71
COL1A1P02452 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.4□□□□□ -1.71
COL1A1P02452 AL353684.1-201ENST00000622677 1120 ntBASIC4.4□□□□□ -1.71
COL1A1P02452 AC091905.1-201ENST00000624400 311 ntBASIC4.4□□□□□ -1.71
COL1A1P02452 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.4□□□□□ -1.71
COL1A1P02452 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.4□□□□□ -1.71
COL1A1P02452 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL1A1P02452 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL1A1P02452 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL1A1P02452 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
COL1A1P02452 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL1A1P02452 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.39□□□□□ -1.71
COL1A1P02452 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL1A1P02452 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL1A1P02452 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.39□□□□□ -1.71
COL1A1P02452 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.39□□□□□ -1.71
COL1A1P02452 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.39□□□□□ -1.71
COL1A1P02452 AL691447.1-201ENST00000419456 387 ntBASIC4.39□□□□□ -1.71
COL1A1P02452 SDCBPP2-201ENST00000424643 885 ntBASIC4.39□□□□□ -1.71
COL1A1P02452 AC005326.1-201ENST00000429197 123 ntBASIC4.39□□□□□ -1.71
COL1A1P02452 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL1A1P02452 AC006480.1-201ENST00000449887 378 ntBASIC4.39□□□□□ -1.71
COL1A1P02452 AC017015.1-201ENST00000477387 286 ntBASIC4.39□□□□□ -1.71
COL1A1P02452 RPS29P2-201ENST00000479278 136 ntBASIC4.39□□□□□ -1.71
COL1A1P02452 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.39□□□□□ -1.71
COL1A1P02452 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms