Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC087650.1-201ENST00000431445 468 ntBASIC4.31□□□□□ -1.72
MSH4O15457 SNORA71B-202ENST00000439232 272 ntBASIC4.31□□□□□ -1.72
MSH4O15457 AC114878.1-201ENST00000441166 358 ntBASIC4.31□□□□□ -1.72
MSH4O15457 UBDP1-202ENST00000457888 382 ntBASIC4.31□□□□□ -1.72
MSH4O15457 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.31□□□□□ -1.72
MSH4O15457 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.31□□□□□ -1.72
MSH4O15457 AC084198.1-201ENST00000477747 402 ntBASIC4.31□□□□□ -1.72
MSH4O15457 CDH12P2-201ENST00000504393 298 ntBASIC4.31□□□□□ -1.72
MSH4O15457 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.31□□□□□ -1.72
MSH4O15457 RAC1P2-201ENST00000511164 579 ntBASIC4.31□□□□□ -1.72
MSH4O15457 RNU6-760P-201ENST00000516078 97 ntBASIC4.31□□□□□ -1.72
MSH4O15457 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.31□□□□□ -1.72
MSH4O15457 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.31□□□□□ -1.72
MSH4O15457 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.31□□□□□ -1.72
MSH4O15457 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.31□□□□□ -1.72
MSH4O15457 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.31□□□□□ -1.72
MSH4O15457 MIR1254-2-201ENST00000579553 63 ntBASIC4.31□□□□□ -1.72
MSH4O15457 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MSH4O15457 AC005344.1-201ENST00000613391 459 ntBASIC4.31□□□□□ -1.72
MSH4O15457 AC009032.1-201ENST00000617574 431 ntBASIC4.31□□□□□ -1.72
MSH4O15457 AP002967.1-201ENST00000624203 539 ntBASIC4.31□□□□□ -1.72
MSH4O15457 ATE1-AS1-202ENST00000636460 506 ntBASIC4.31□□□□□ -1.72
MSH4O15457 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.31□□□□□ -1.72
MSH4O15457 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.31□□□□□ -1.72
MSH4O15457 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
MSH4O15457 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MSH4O15457 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
MSH4O15457 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
MSH4O15457 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
MSH4O15457 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
MSH4O15457 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MSH4O15457 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MSH4O15457 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
MSH4O15457 AC068254.2-201ENST00000623938 3577 ntBASIC4.3□□□□□ -1.72
MSH4O15457 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.3□□□□□ -1.72
MSH4O15457 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
MSH4O15457 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
MSH4O15457 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
MSH4O15457 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.3□□□□□ -1.72
MSH4O15457 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
MSH4O15457 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
MSH4O15457 LINC02471-203ENST00000641941 4752 ntBASIC4.3□□□□□ -1.72
MSH4O15457 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
MSH4O15457 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
MSH4O15457 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.3□□□□□ -1.72
MSH4O15457 SOD2P1-201ENST00000396543 562 ntBASIC4.3□□□□□ -1.72
MSH4O15457 RN7SKP222-201ENST00000410651 315 ntBASIC4.3□□□□□ -1.72
MSH4O15457 AL160275.2-201ENST00000412010 394 ntBASIC4.3□□□□□ -1.72
MSH4O15457 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
MSH4O15457 AL591419.1-201ENST00000427423 339 ntBASIC4.3□□□□□ -1.72
MSH4O15457 NDUFA5P10-201ENST00000432147 357 ntBASIC4.3□□□□□ -1.72
MSH4O15457 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.3□□□□□ -1.72
MSH4O15457 AL353748.1-201ENST00000440753 474 ntBASIC4.3□□□□□ -1.72
MSH4O15457 AL157827.1-201ENST00000447622 132 ntBASIC4.3□□□□□ -1.72
MSH4O15457 MTND3P4-201ENST00000453537 303 ntBASIC4.3□□□□□ -1.72
MSH4O15457 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
MSH4O15457 RN7SL809P-201ENST00000482040 297 ntBASIC4.3□□□□□ -1.72
MSH4O15457 AC020593.1-201ENST00000507399 299 ntBASIC4.3□□□□□ -1.72
MSH4O15457 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.3□□□□□ -1.72
MSH4O15457 AC007991.1-201ENST00000522680 631 ntBASIC4.3□□□□□ -1.72
MSH4O15457 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.3□□□□□ -1.72
MSH4O15457 AC012414.2-201ENST00000559474 187 ntBASIC4.3□□□□□ -1.72
MSH4O15457 AC008638.3-201ENST00000603341 463 ntBASIC4.3□□□□□ -1.72
MSH4O15457 AC133552.5-201ENST00000604266 540 ntBASIC4.3□□□□□ -1.72
MSH4O15457 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.3□□□□□ -1.72
MSH4O15457 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.3□□□□□ -1.72
MSH4O15457 AC233309.1-201ENST00000619522 751 ntBASIC4.3□□□□□ -1.72
MSH4O15457 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.3□□□□□ -1.72
MSH4O15457 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
MSH4O15457 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
MSH4O15457 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
MSH4O15457 AP004289.2-201ENST00000444413 1457 ntBASIC4.3□□□□□ -1.72
MSH4O15457 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
MSH4O15457 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.29□□□□□ -1.72
MSH4O15457 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.29□□□□□ -1.72
MSH4O15457 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.29□□□□□ -1.72
MSH4O15457 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
MSH4O15457 RNA5SP124-201ENST00000362739 110 ntBASIC4.29□□□□□ -1.72
MSH4O15457 RNU6-31P-201ENST00000384388 108 ntBASIC4.29□□□□□ -1.72
MSH4O15457 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
MSH4O15457 AL589655.1-201ENST00000405398 482 ntBASIC4.29□□□□□ -1.72
MSH4O15457 MTND2P15-201ENST00000418575 892 ntBASIC4.29□□□□□ -1.72
MSH4O15457 NPM1P34-201ENST00000428821 893 ntBASIC4.29□□□□□ -1.72
MSH4O15457 NOTCH2P1-201ENST00000443481 624 ntBASIC4.29□□□□□ -1.72
MSH4O15457 AL500522.2-201ENST00000448562 343 ntBASIC4.29□□□□□ -1.72
MSH4O15457 AL133162.1-201ENST00000463228 453 ntBASIC4.29□□□□□ -1.72
MSH4O15457 AC090543.1-201ENST00000492168 485 ntBASIC4.29□□□□□ -1.72
MSH4O15457 AC025445.1-201ENST00000502728 300 ntBASIC4.29□□□□□ -1.72
MSH4O15457 AC108941.1-201ENST00000502853 530 ntBASIC4.29□□□□□ -1.72
MSH4O15457 SAP18P1-201ENST00000512058 390 ntBASIC4.29□□□□□ -1.72
MSH4O15457 RNA5SP208-201ENST00000516156 78 ntBASIC4.29□□□□□ -1.72
MSH4O15457 RNU1-45P-201ENST00000517191 141 ntBASIC4.29□□□□□ -1.72
MSH4O15457 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.29□□□□□ -1.72
MSH4O15457 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.29□□□□□ -1.72
MSH4O15457 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.29□□□□□ -1.72
MSH4O15457 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
MSH4O15457 MTCO1P49-201ENST00000523429 802 ntBASIC4.29□□□□□ -1.72
MSH4O15457 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.29□□□□□ -1.72
MSH4O15457 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.29□□□□□ -1.72
MSH4O15457 AL390816.3-201ENST00000604527 1066 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms