Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 AC006946.3-201ENST00000609791 756 ntBASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 AC009032.1-201ENST00000617574 431 ntBASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM49D1C9J1S8 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 MTND4P21-201ENST00000453886 1357 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 RNA5SP130-201ENST00000364431 114 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 RNU6-40P-201ENST00000384254 107 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AC136624.1-201ENST00000400791 413 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AL391417.1-201ENST00000404100 426 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AL136131.1-201ENST00000406079 803 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 RAB28P1-201ENST00000411517 641 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 RHEBP3-201ENST00000411920 351 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 Z97055.1-201ENST00000419730 712 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 MTND4LP13-201ENST00000425022 298 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 MOB1AP1-201ENST00000430903 535 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 MTND2P2-201ENST00000434633 945 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 RPS26P40-201ENST00000435209 294 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 Z74696.2-201ENST00000436514 498 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 SNORA71B-202ENST00000439232 272 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AC067904.2-201ENST00000517322 1283 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AC027281.1-201ENST00000574178 758 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AL355802.4-201ENST00000607635 548 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AC083809.1-201ENST00000615051 472 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AL445567.2-201ENST00000618935 498 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AL162233.1-201ENST00000620014 944 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AC079684.1-201ENST00000621405 437 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AC105105.5-201ENST00000622635 1294 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AP006248.3-201ENST00000623580 594 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AC093311.1-201ENST00000506586 2021 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 AC074029.4-201ENST00000624796 1859 ntBASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TRIM49D1C9J1S8 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 AC009229.4-201ENST00000623854 1947 ntBASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 RPS4XP5-202ENST00000449995 1334 ntBASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 Z98941.1-201ENST00000407764 100 ntBASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 OR8G2P-201ENST00000412796 908 ntBASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 COX6CP17-201ENST00000421389 185 ntBASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 AJ239321.1-201ENST00000424255 564 ntBASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 HIGD1AP12-201ENST00000427832 281 ntBASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 RPS20P1-201ENST00000434853 354 ntBASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 AP000949.1-201ENST00000438328 629 ntBASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 NANOGP10-201ENST00000453325 895 ntBASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 AC026979.1-201ENST00000492525 396 ntBASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 AC108941.1-201ENST00000502853 530 ntBASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 AC138701.1-201ENST00000524329 714 ntBASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 AL512506.1-201ENST00000613918 449 ntBASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 237.4 ms