Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MTCO3P4-201ENST00000419236 787 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC073310.1-201ENST00000423226 1033 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 FTH1P6-201ENST00000430768 320 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC087650.1-201ENST00000431445 468 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 FABP5P3-201ENST00000437960 408 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 CACYBPP1-201ENST00000438592 684 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC044797.1-201ENST00000445744 679 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 RPL7P22-201ENST00000466005 733 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 RPL35AP15-201ENST00000468042 339 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC021451.1-201ENST00000523498 1129 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC021006.3-201ENST00000530771 192 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC007424.1-203ENST00000554613 687 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 MIR3667-201ENST00000581025 74 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC124283.4-201ENST00000581815 456 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC079587.1-201ENST00000603846 277 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC098935.2-201ENST00000604222 466 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC099785.1-201ENST00000605697 437 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AL021997.2-201ENST00000615674 271 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC093875.1-201ENST00000623688 504 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC021106.3-201ENST00000623925 531 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.09□□□□□ -1.76
NDE1Q9NXR1 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
NDE1Q9NXR1 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
NDE1Q9NXR1 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.09□□□□□ -1.76
NDE1Q9NXR1 AC007529.1-201ENST00000418574 2178 ntBASIC4.09□□□□□ -1.76
NDE1Q9NXR1 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AP002784.2-201ENST00000397300 549 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 RNU6-584P-201ENST00000410350 95 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 MTCO2P17-201ENST00000424336 677 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 RPL12P34-201ENST00000424532 479 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 FO393419.3-201ENST00000428741 282 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AC096638.2-201ENST00000434965 711 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 RPS7P2-201ENST00000435134 607 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 Z80107.1-201ENST00000436830 412 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 RPL6P5-201ENST00000445678 828 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 RPS3AP53-201ENST00000454716 778 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AC021205.1-201ENST00000468797 348 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 RPS17P11-201ENST00000474297 293 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AP000926.1-201ENST00000479573 241 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AC108729.1-201ENST00000487812 947 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 RPS27AP16-201ENST00000492222 470 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 NCAPGP1-201ENST00000505112 1814 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 CBX3P5-201ENST00000552017 521 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AL049870.4-201ENST00000555741 486 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AC073091.2-201ENST00000603205 907 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AC123786.2-201ENST00000603459 275 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AC104662.1-201ENST00000604448 511 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 RNU6-1192P-201ENST00000612197 107 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 RNU6-489P-201ENST00000618289 107 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AC010435.1-201ENST00000623353 1177 ntBASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 AC006927.2-201ENST00000639256 389 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms