Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RNA5SP322-201ENST00000363617 119 ntBASIC3.88□□□□□ -1.79
TREX1Q9NSU2 HMGN2P8-201ENST00000391458 268 ntBASIC3.88□□□□□ -1.79
TREX1Q9NSU2 HLFP1-201ENST00000402375 499 ntBASIC3.88□□□□□ -1.79
TREX1Q9NSU2 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 Z97055.1-201ENST00000419730 712 ntBASIC3.88□□□□□ -1.79
TREX1Q9NSU2 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 Z74696.2-201ENST00000436514 498 ntBASIC3.88□□□□□ -1.79
TREX1Q9NSU2 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.88□□□□□ -1.79
TREX1Q9NSU2 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.88□□□□□ -1.79
TREX1Q9NSU2 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 RPL31P20-201ENST00000449593 360 ntBASIC3.88□□□□□ -1.79
TREX1Q9NSU2 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 AC084198.1-201ENST00000477747 402 ntBASIC3.88□□□□□ -1.79
TREX1Q9NSU2 AC005912.1-201ENST00000495392 255 ntBASIC3.88□□□□□ -1.79
TREX1Q9NSU2 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 IGLVIV-53-201ENST00000520107 367 ntBASIC3.88□□□□□ -1.79
TREX1Q9NSU2 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.88□□□□□ -1.79
TREX1Q9NSU2 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 ABI1P1-201ENST00000603375 1120 ntBASIC3.88□□□□□ -1.79
TREX1Q9NSU2 AC005229.3-201ENST00000603438 323 ntBASIC3.88□□□□□ -1.79
TREX1Q9NSU2 HMGB1P50-201ENST00000605814 607 ntBASIC3.88□□□□□ -1.79
TREX1Q9NSU2 AC010857.1-201ENST00000606398 594 ntBASIC3.88□□□□□ -1.79
TREX1Q9NSU2 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 AC006338.2-201ENST00000616864 791 ntBASIC3.88□□□□□ -1.79
TREX1Q9NSU2 AL713922.2-201ENST00000619384 716 ntBASIC3.88□□□□□ -1.79
TREX1Q9NSU2 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
TREX1Q9NSU2 MFSD8-220ENST00000641243 1422 ntBASIC3.87□□□□□ -1.79
TREX1Q9NSU2 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 RNU1-13P-201ENST00000384499 162 ntBASIC3.87□□□□□ -1.79
TREX1Q9NSU2 RNU1-89P-201ENST00000384592 164 ntBASIC3.87□□□□□ -1.79
TREX1Q9NSU2 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 ZNF603P-201ENST00000405613 487 ntBASIC3.87□□□□□ -1.79
TREX1Q9NSU2 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 RPL7P53-201ENST00000421245 739 ntBASIC3.87□□□□□ -1.79
TREX1Q9NSU2 NPM1P24-201ENST00000428039 894 ntBASIC3.87□□□□□ -1.79
TREX1Q9NSU2 IFNNP1-201ENST00000429219 553 ntBASIC3.87□□□□□ -1.79
TREX1Q9NSU2 CCRL1P1-201ENST00000449542 1053 ntBASIC3.87□□□□□ -1.79
TREX1Q9NSU2 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 OR7L1P-201ENST00000456181 380 ntBASIC3.87□□□□□ -1.79
TREX1Q9NSU2 RPL21P11-201ENST00000461458 483 ntBASIC3.87□□□□□ -1.79
TREX1Q9NSU2 NDUFA5P9-201ENST00000472609 340 ntBASIC3.87□□□□□ -1.79
TREX1Q9NSU2 RPS3AP6-201ENST00000484430 795 ntBASIC3.87□□□□□ -1.79
TREX1Q9NSU2 RPS4XP15-201ENST00000489210 795 ntBASIC3.87□□□□□ -1.79
TREX1Q9NSU2 AC110792.1-201ENST00000491826 472 ntBASIC3.87□□□□□ -1.79
TREX1Q9NSU2 FTH1P21-201ENST00000512179 511 ntBASIC3.87□□□□□ -1.79
TREX1Q9NSU2 AC108064.1-201ENST00000513791 460 ntBASIC3.87□□□□□ -1.79
TREX1Q9NSU2 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 OR4A12P-201ENST00000530847 918 ntBASIC3.87□□□□□ -1.79
TREX1Q9NSU2 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 AC084033.1-201ENST00000550830 633 ntBASIC3.87□□□□□ -1.79
TREX1Q9NSU2 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 EIF1P6-201ENST00000600054 334 ntBASIC3.87□□□□□ -1.79
TREX1Q9NSU2 AL590392.1-201ENST00000604960 446 ntBASIC3.87□□□□□ -1.79
TREX1Q9NSU2 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 MIR378J-201ENST00000611988 109 ntBASIC3.87□□□□□ -1.79
TREX1Q9NSU2 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 C2orf27A-204ENST00000623058 969 ntBASIC3.87□□□□□ -1.79
TREX1Q9NSU2 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TREX1Q9NSU2 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 RN7SKP222-201ENST00000410651 315 ntBASIC3.86□□□□□ -1.79
TREX1Q9NSU2 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 OR5AW1P-201ENST00000426334 1006 ntBASIC3.86□□□□□ -1.79
TREX1Q9NSU2 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms