Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 RN7SKP13-201ENST00000515933 244 ntBASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 AC023161.2-201ENST00000551218 780 ntBASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 AC005344.1-201ENST00000613391 459 ntBASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 MIR6075-201ENST00000620782 95 ntBASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 AC093535.2-201ENST00000624769 2326 ntBASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 AP004289.2-201ENST00000444413 1457 ntBASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 AC245052.5-201ENST00000416320 649 ntBASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 AC010740.1-201ENST00000417035 684 ntBASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 SETP10-201ENST00000424368 814 ntBASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 AF228730.2-201ENST00000438784 848 ntBASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 AC007688.1-201ENST00000475592 759 ntBASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 RN7SKP18-201ENST00000516005 275 ntBASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 DUXAP2-201ENST00000519198 589 ntBASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 AC133552.5-201ENST00000604266 540 ntBASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 AL008729.2-201ENST00000606393 473 ntBASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 AC022149.2-201ENST00000621061 203 ntBASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KIAA1549Q9HCM3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 AL627171.1-201ENST00000618845 1308 ntBASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 NR1H5P-201ENST00000452683 1377 ntBASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 MIR449B-201ENST00000384995 97 ntBASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 RNA5SP104-201ENST00000410989 118 ntBASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 RPL23AP83-201ENST00000434984 473 ntBASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 AL591363.1-201ENST00000450091 483 ntBASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 RPL7P49-201ENST00000471402 708 ntBASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 RN7SKP157-201ENST00000516174 282 ntBASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 CYCSP30-201ENST00000546447 172 ntBASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 MRPS35P3-201ENST00000603189 709 ntBASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 AL359715.5-201ENST00000623431 443 ntBASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 AC092111.2-201ENST00000611627 1414 ntBASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
KIAA1549Q9HCM3 RNA5SP197-201ENST00000363357 119 ntBASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 PPIAP3-201ENST00000450588 505 ntBASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 AC106707.2-201ENST00000484182 374 ntBASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 UBA52P3-201ENST00000491303 382 ntBASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 IGLVIV-53-201ENST00000520107 367 ntBASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 OR4A12P-201ENST00000530847 918 ntBASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 SULT1C2P2-201ENST00000562517 294 ntBASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 RN7SL339P-201ENST00000580597 296 ntBASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 MIR3922-201ENST00000585192 84 ntBASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 AC020914.6-201ENST00000594327 272 ntBASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 AP003392.5-201ENST00000607857 415 ntBASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 AC096577.2-201ENST00000611455 153 ntBASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 AC243312.2-201ENST00000623340 601 ntBASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 OR5AC4P-202ENST00000642086 985 ntBASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 AC007823.1-201ENST00000569932 1566 ntBASIC3.34□□□□□ -1.87
KIAA1549Q9HCM3 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms